Protein–RNA interactions for Protein: Q02199

NUP49, Nucleoporin NUP49/NSP49, yeastyeast

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP49Q02199 KRR1YCL059C 951 nt8.17□□□□□ -1.1
NUP49Q02199 OYE2YHR179W 1203 nt8.17□□□□□ -1.1
NUP49Q02199 TIP1YBR067C 633 nt8.17□□□□□ -1.1
NUP49Q02199 DPL1YDR294C 1770 nt8.17□□□□□ -1.1
NUP49Q02199 RPT5YOR117W 1305 nt8.16□□□□□ -1.1
NUP49Q02199 YOR072WYOR072W 315 nt8.15□□□□□ -1.1
NUP49Q02199 SNX3YOR357C 489 nt8.15□□□□□ -1.1
NUP49Q02199 ERG13YML126C 1476 nt8.14□□□□□ -1.11
NUP49Q02199 ILV2YMR108W 2064 nt8.14□□□□□ -1.11
NUP49Q02199 SAC7YDR389W 1965 nt8.14□□□□□ -1.11
NUP49Q02199 YJL118WYJL118W 660 nt8.13□□□□□ -1.11
NUP49Q02199 INH1YDL181W 258 nt8.12□□□□□ -1.11
NUP49Q02199 LSM5YER146W 282 nt8.12□□□□□ -1.11
NUP49Q02199 TPS1YBR126C 1488 nt8.12□□□□□ -1.11
NUP49Q02199 LEU4YNL104C 1860 nt8.11□□□□□ -1.11
NUP49Q02199 LSB3YFR024C-A 1380 nt8.1□□□□□ -1.11
NUP49Q02199 DDI1YER143W 1287 nt8.09□□□□□ -1.11
NUP49Q02199 DTR1YBR180W 1719 nt8.09□□□□□ -1.11
NUP49Q02199 HXT12YIL170W 1374 nt8.09□□□□□ -1.12
NUP49Q02199 GTB1YDR221W 2109 nt8.08□□□□□ -1.12
NUP49Q02199 YPI1YFR003C 468 nt8.07□□□□□ -1.12
NUP49Q02199 RRT8YOL048C 1029 nt8.07□□□□□ -1.12
NUP49Q02199 FET5YFL041W 1869 nt8.06□□□□□ -1.12
NUP49Q02199 TMA23YMR269W 636 nt8.06□□□□□ -1.12
NUP49Q02199 YMR265CYMR265C 1386 nt8.06□□□□□ -1.12
NUP49Q02199 MEX67YPL169C 1800 nt8.05□□□□□ -1.12
NUP49Q02199 VRG4YGL225W 1014 nt8.04□□□□□ -1.12
NUP49Q02199 YJL055WYJL055W 738 nt8.04□□□□□ -1.12
NUP49Q02199 NPP2YEL016C 1482 nt8.04□□□□□ -1.12
NUP49Q02199 tD(GUC)BtD(GUC)B 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)DtD(GUC)D 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)G1tD(GUC)G1 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)G2tD(GUC)G2 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)I1tD(GUC)I1 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)I2tD(GUC)I2 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)J1tD(GUC)J1 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)J2tD(GUC)J2 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)J3tD(GUC)J3 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)J4tD(GUC)J4 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)KtD(GUC)K 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)L1tD(GUC)L1 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)L2tD(GUC)L2 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)MtD(GUC)M 72 nt8.03□□□□□ -1.12
NUP49Q02199 tD(GUC)OtD(GUC)O 72 nt8.03□□□□□ -1.12
NUP49Q02199 tE(CUC)DtE(CUC)D 72 nt8.03□□□□□ -1.12
NUP49Q02199 tE(CUC)ItE(CUC)I 72 nt8.03□□□□□ -1.12
NUP49Q02199 ELO1YJL196C 933 nt8.03□□□□□ -1.12
NUP49Q02199 HAP5YOR358W 729 nt8.02□□□□□ -1.13
NUP49Q02199 RFC1YOR217W 2586 nt8.02□□□□□ -1.13
NUP49Q02199 THI72YOR192C 1800 nt8.01□□□□□ -1.13
NUP49Q02199 YDR467CYDR467C 327 nt8.01□□□□□ -1.13
NUP49Q02199 IMO32YGR031W 1029 nt8.01□□□□□ -1.13
NUP49Q02199 YNR029CYNR029C 1290 nt8.01□□□□□ -1.13
NUP49Q02199 YNR064CYNR064C 873 nt8.01□□□□□ -1.13
NUP49Q02199 MIM1YOL026C 342 nt8.01□□□□□ -1.13
NUP49Q02199 RIB7YBR153W 735 nt8.01□□□□□ -1.13
NUP49Q02199 RIB2YOL066C 1776 nt8.01□□□□□ -1.13
NUP49Q02199 GAL3YDR009W 1563 nt8.01□□□□□ -1.13
NUP49Q02199 SUV3YPL029W 2214 nt8.01□□□□□ -1.13
NUP49Q02199 HEM14YER014W 1620 nt8□□□□□ -1.13
NUP49Q02199 RPN14YGL004C 1254 nt7.99□□□□□ -1.13
NUP49Q02199 HBS1YKR084C 1836 nt7.99□□□□□ -1.13
NUP49Q02199 ADH1YOL086C 1047 nt7.98□□□□□ -1.13
NUP49Q02199 YJR114WYJR114W 393 nt7.97□□□□□ -1.13
NUP49Q02199 ADE8YDR408C 645 nt7.96□□□□□ -1.14
NUP49Q02199 KEL3YPL263C 1956 nt7.96□□□□□ -1.14
NUP49Q02199 MDL2YPL270W 2322 nt7.95□□□□□ -1.14
NUP49Q02199 OPI3YJR073C 621 nt7.94□□□□□ -1.14
NUP49Q02199 TRP2YER090W 1524 nt7.93□□□□□ -1.14
NUP49Q02199 GAL2YLR081W 1725 nt7.93□□□□□ -1.14
NUP49Q02199 HXT11YOL156W 1704 nt7.93□□□□□ -1.14
NUP49Q02199 MTO1YGL236C 2010 nt7.93□□□□□ -1.14
NUP49Q02199 CRC1YOR100C 984 nt7.92□□□□□ -1.14
NUP49Q02199 SFL1YOR140W 2301 nt7.92□□□□□ -1.14
NUP49Q02199 THI6YPL214C 1623 nt7.92□□□□□ -1.14
NUP49Q02199 DUR3YHL016C 2208 nt7.91□□□□□ -1.14
NUP49Q02199 GPM1YKL152C 744 nt7.91□□□□□ -1.14
NUP49Q02199 YBL095WYBL095W 813 nt7.9□□□□□ -1.14
NUP49Q02199 DAK2YFL053W 1776 nt7.89□□□□□ -1.15
NUP49Q02199 ORT1YOR130C 879 nt7.89□□□□□ -1.15
NUP49Q02199 snR31snR31 225 nt7.89□□□□□ -1.15
NUP49Q02199 YFR036W-AYFR036W-A 651 nt7.88□□□□□ -1.15
NUP49Q02199 SWT21YNL187W 1074 nt7.88□□□□□ -1.15
NUP49Q02199 YJL195CYJL195C 702 nt7.87□□□□□ -1.15
NUP49Q02199 TVP23YDR084C 600 nt7.86□□□□□ -1.15
NUP49Q02199 MET1YKR069W 1782 nt7.86□□□□□ -1.15
NUP49Q02199 SRM1YGL097W 1449 nt7.86□□□□□ -1.15
NUP49Q02199 AAT1YKL106W 1356 nt7.85□□□□□ -1.15
NUP49Q02199 EMC3YKL207W 762 nt7.85□□□□□ -1.15
NUP49Q02199 TOK1YJL093C 2076 nt7.85□□□□□ -1.15
NUP49Q02199 THI3YDL080C 1830 nt7.84□□□□□ -1.15
NUP49Q02199 KGD2YDR148C 1392 nt7.84□□□□□ -1.16
NUP49Q02199 YMC2YBR104W 990 nt7.83□□□□□ -1.16
NUP49Q02199 FIT1YDR534C 1587 nt7.83□□□□□ -1.16
NUP49Q02199 RSC4YKR008W 1878 nt7.83□□□□□ -1.16
NUP49Q02199 CCT5YJR064W 1689 nt7.83□□□□□ -1.16
NUP49Q02199 FUN14YAL008W 597 nt7.82□□□□□ -1.16
NUP49Q02199 SNZ1YMR096W 894 nt7.82□□□□□ -1.16
NUP49Q02199 snR4snR4 186 nt7.82□□□□□ -1.16
NUP49Q02199 YLR072WYLR072W 2082 nt7.82□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 17.3 ms