Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gcm1P70348 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gcm1P70348 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gcm1P70348 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.22■□□□□ 0.83
Gcm1P70348 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gcm1P70348 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gcm1P70348 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gcm1P70348 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.21■□□□□ 0.83
Gcm1P70348 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gcm1P70348 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gcm1P70348 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gcm1P70348 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gcm1P70348 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Gcm1P70348 Nkain2-201ENSMUST00000092602 558 ntBASIC20.2■□□□□ 0.82
Gcm1P70348 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gcm1P70348 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gcm1P70348 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gcm1P70348 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Gcm1P70348 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gcm1P70348 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gcm1P70348 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gcm1P70348 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gcm1P70348 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gcm1P70348 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.16■□□□□ 0.82
Gcm1P70348 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Gcm1P70348 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gcm1P70348 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gcm1P70348 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gcm1P70348 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gcm1P70348 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gcm1P70348 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gcm1P70348 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gcm1P70348 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gcm1P70348 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.14■□□□□ 0.81
Gcm1P70348 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gcm1P70348 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Gcm1P70348 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gcm1P70348 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gcm1P70348 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gcm1P70348 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gcm1P70348 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gcm1P70348 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gcm1P70348 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gcm1P70348 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gcm1P70348 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gcm1P70348 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gcm1P70348 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.09■□□□□ 0.81
Gcm1P70348 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gcm1P70348 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gcm1P70348 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gcm1P70348 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gcm1P70348 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gcm1P70348 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gcm1P70348 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.06■□□□□ 0.8
Gcm1P70348 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.06■□□□□ 0.8
Gcm1P70348 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gcm1P70348 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gcm1P70348 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gcm1P70348 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Gcm1P70348 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gcm1P70348 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gcm1P70348 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gcm1P70348 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gcm1P70348 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.02■□□□□ 0.8
Gcm1P70348 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gcm1P70348 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gcm1P70348 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.01■□□□□ 0.79
Gcm1P70348 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.01■□□□□ 0.79
Gcm1P70348 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
Gcm1P70348 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gcm1P70348 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gcm1P70348 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.99■□□□□ 0.79
Gcm1P70348 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.99■□□□□ 0.79
Gcm1P70348 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gcm1P70348 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gcm1P70348 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gcm1P70348 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gcm1P70348 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gcm1P70348 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gcm1P70348 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Gcm1P70348 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gcm1P70348 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gcm1P70348 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.95■□□□□ 0.78
Gcm1P70348 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gcm1P70348 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Gcm1P70348 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Gcm1P70348 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gcm1P70348 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gcm1P70348 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gcm1P70348 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.95■□□□□ 0.78
Gcm1P70348 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gcm1P70348 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gcm1P70348 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.94■□□□□ 0.78
Gcm1P70348 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gcm1P70348 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gcm1P70348 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.93■□□□□ 0.78
Gcm1P70348 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gcm1P70348 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Gcm1P70348 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gcm1P70348 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms