Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 RAS2YNL098C 969 nt7.4□□□□□ -1.22
SSU72P53538 DAK2YFL053W 1776 nt7.39□□□□□ -1.23
SSU72P53538 QDR2YIL121W 1629 nt7.39□□□□□ -1.23
SSU72P53538 LSB3YFR024C-A 1380 nt7.38□□□□□ -1.23
SSU72P53538 YHR218WYHR218W 1812 nt7.38□□□□□ -1.23
SSU72P53538 RPT5YOR117W 1305 nt7.37□□□□□ -1.23
SSU72P53538 YLR437C-AYLR437C-A 228 nt7.37□□□□□ -1.23
SSU72P53538 SGA1YIL099W 1650 nt7.36□□□□□ -1.23
SSU72P53538 FIT1YDR534C 1587 nt7.36□□□□□ -1.23
SSU72P53538 MET30YIL046W 1923 nt7.36□□□□□ -1.23
SSU72P53538 LSB6YJL100W 1824 nt7.36□□□□□ -1.23
SSU72P53538 HEM13YDR044W 987 nt7.35□□□□□ -1.23
SSU72P53538 YPI1YFR003C 468 nt7.34□□□□□ -1.23
SSU72P53538 VRG4YGL225W 1014 nt7.34□□□□□ -1.23
SSU72P53538 OYE2YHR179W 1203 nt7.34□□□□□ -1.23
SSU72P53538 ENT4YLL038C 744 nt7.34□□□□□ -1.23
SSU72P53538 RIB7YBR153W 735 nt7.34□□□□□ -1.23
SSU72P53538 RBG2YGR173W 1107 nt7.33□□□□□ -1.24
SSU72P53538 ASP3-1YLR155C 1089 nt7.33□□□□□ -1.24
SSU72P53538 ASP3-2YLR157C 1089 nt7.33□□□□□ -1.24
SSU72P53538 ASP3-3YLR158C 1089 nt7.33□□□□□ -1.24
SSU72P53538 ASP3-4YLR160C 1089 nt7.33□□□□□ -1.24
SSU72P53538 GPN2YOR262W 1044 nt7.33□□□□□ -1.24
SSU72P53538 ADE5,7YGL234W 2409 nt7.33□□□□□ -1.24
SSU72P53538 SOL2YCR073W-A 948 nt7.32□□□□□ -1.24
SSU72P53538 GUT1YHL032C 2130 nt7.32□□□□□ -1.24
SSU72P53538 CAB5YDR196C 726 nt7.31□□□□□ -1.24
SSU72P53538 YJL118WYJL118W 660 nt7.31□□□□□ -1.24
SSU72P53538 HXT12YIL170W 1374 nt7.31□□□□□ -1.24
SSU72P53538 AIM1YAL046C 357 nt7.3□□□□□ -1.24
SSU72P53538 YLR046CYLR046C 813 nt7.3□□□□□ -1.24
SSU72P53538 YNL190WYNL190W 615 nt7.3□□□□□ -1.24
SSU72P53538 EAF3YPR023C 1206 nt7.29□□□□□ -1.24
SSU72P53538 SSL2YIL143C 2532 nt7.28□□□□□ -1.24
SSU72P53538 GID8YMR135C 1368 nt7.27□□□□□ -1.25
SSU72P53538 SAM3YPL274W 1764 nt7.26□□□□□ -1.25
SSU72P53538 YJL055WYJL055W 738 nt7.26□□□□□ -1.25
SSU72P53538 TPS1YBR126C 1488 nt7.25□□□□□ -1.25
SSU72P53538 LSM5YER146W 282 nt7.25□□□□□ -1.25
SSU72P53538 NDE1YMR145C 1683 nt7.24□□□□□ -1.25
SSU72P53538 TAT2YOL020W 1779 nt7.23□□□□□ -1.25
SSU72P53538 YKL133CYKL133C 1392 nt7.23□□□□□ -1.25
SSU72P53538 RIB2YOL066C 1776 nt7.23□□□□□ -1.25
SSU72P53538 ZAP1YJL056C 2643 nt7.21□□□□□ -1.26
SSU72P53538 NBA1YOL070C 1506 nt7.21□□□□□ -1.26
SSU72P53538 DLD3YEL071W 1491 nt7.2□□□□□ -1.26
SSU72P53538 LAS17YOR181W 1902 nt7.2□□□□□ -1.26
SSU72P53538 RPD3YNL330C 1302 nt7.2□□□□□ -1.26
SSU72P53538 CMK2YOL016C 1344 nt7.2□□□□□ -1.26
SSU72P53538 GAL3YDR009W 1563 nt7.2□□□□□ -1.26
SSU72P53538 TMA23YMR269W 636 nt7.19□□□□□ -1.26
SSU72P53538 FRT1YOR324C 1809 nt7.19□□□□□ -1.26
SSU72P53538 MRS6YOR370C 1812 nt7.19□□□□□ -1.26
SSU72P53538 ERG13YML126C 1476 nt7.18□□□□□ -1.26
SSU72P53538 DDI1YER143W 1287 nt7.18□□□□□ -1.26
SSU72P53538 TIM44YIL022W 1296 nt7.18□□□□□ -1.26
SSU72P53538 CWP2YKL096W-A 279 nt7.18□□□□□ -1.26
SSU72P53538 YNR029CYNR029C 1290 nt7.18□□□□□ -1.26
SSU72P53538 RRT8YOL048C 1029 nt7.18□□□□□ -1.26
SSU72P53538 ODC1YPL134C 933 nt7.18□□□□□ -1.26
SSU72P53538 TIP1YBR067C 633 nt7.18□□□□□ -1.26
SSU72P53538 BEM1YBR200W 1656 nt7.18□□□□□ -1.26
SSU72P53538 KRR1YCL059C 951 nt7.17□□□□□ -1.26
SSU72P53538 MIM1YOL026C 342 nt7.17□□□□□ -1.26
SSU72P53538 VMA11YPL234C 495 nt7.17□□□□□ -1.26
SSU72P53538 YHR219WYHR219W 1875 nt7.16□□□□□ -1.26
SSU72P53538 YDR455CYDR455C 309 nt7.16□□□□□ -1.26
SSU72P53538 IMO32YGR031W 1029 nt7.16□□□□□ -1.26
SSU72P53538 ADH1YOL086C 1047 nt7.16□□□□□ -1.26
SSU72P53538 GGC1YDL198C 903 nt7.15□□□□□ -1.26
SSU72P53538 MET1YKR069W 1782 nt7.15□□□□□ -1.27
SSU72P53538 MDM35YKL053C-A 261 nt7.14□□□□□ -1.27
SSU72P53538 LSR1LSR1 1175 nt7.14□□□□□ -1.27
SSU72P53538 ADE8YDR408C 645 nt7.13□□□□□ -1.27
SSU72P53538 YJR114WYJR114W 393 nt7.12□□□□□ -1.27
SSU72P53538 AAC3YBR085W 924 nt7.12□□□□□ -1.27
SSU72P53538 PMA2YPL036W 2844 nt7.11□□□□□ -1.27
SSU72P53538 CCR4YAL021C 2514 nt7.11□□□□□ -1.27
SSU72P53538 YIL177CYIL177C 5277 nt7.11□□□□□ -1.27
SSU72P53538 ITR2YOL103W 1830 nt7.11□□□□□ -1.27
SSU72P53538 RPN14YGL004C 1254 nt7.1□□□□□ -1.27
SSU72P53538 YMR262WYMR262W 942 nt7.1□□□□□ -1.27
SSU72P53538 CTF3YLR381W 2202 nt7.1□□□□□ -1.27
SSU72P53538 YJL195CYJL195C 702 nt7.09□□□□□ -1.27
SSU72P53538 YNR064CYNR064C 873 nt7.09□□□□□ -1.27
SSU72P53538 SNX3YOR357C 489 nt7.09□□□□□ -1.27
SSU72P53538 IML3YBR107C 738 nt7.08□□□□□ -1.28
SSU72P53538 HBS1YKR084C 1836 nt7.08□□□□□ -1.28
SSU72P53538 SAC7YDR389W 1965 nt7.08□□□□□ -1.28
SSU72P53538 CCT5YJR064W 1689 nt7.07□□□□□ -1.28
SSU72P53538 YRF1-1YDR545W 5391 nt7.06□□□□□ -1.28
SSU72P53538 YRF1-5YLR467W 5391 nt7.06□□□□□ -1.28
SSU72P53538 YRF1-8YOR396W 5391 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)BtD(GUC)B 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)DtD(GUC)D 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)G1tD(GUC)G1 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)G2tD(GUC)G2 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)I1tD(GUC)I1 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)I2tD(GUC)I2 72 nt7.06□□□□□ -1.28
SSU72P53538 tD(GUC)J1tD(GUC)J1 72 nt7.06□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms