Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.27■■□□□ 1.32
HCFC1P51610 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
HCFC1P51610 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
HCFC1P51610 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HCFC1P51610 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC1P51610 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC1P51610 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.25■■□□□ 1.31
HCFC1P51610 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HCFC1P51610 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HCFC1P51610 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.23■■□□□ 1.31
HCFC1P51610 DUX4L13-201ENST00000554103 1267 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L15-201ENST00000611059 1267 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L23-201ENST00000615195 1269 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L24-201ENST00000617576 1269 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L22-201ENST00000618238 1269 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L20-201ENST00000619712 1269 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L21-201ENST00000622058 1269 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L10-201ENST00000622460 1267 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 DUX4L25-201ENST00000624915 1269 ntBASIC23.22■■□□□ 1.31
HCFC1P51610 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.21■■□□□ 1.31
HCFC1P51610 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HCFC1P51610 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC1P51610 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HCFC1P51610 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.2■■□□□ 1.3
HCFC1P51610 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
HCFC1P51610 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
HCFC1P51610 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.19■■□□□ 1.3
HCFC1P51610 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.19■■□□□ 1.3
HCFC1P51610 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
HCFC1P51610 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1P51610 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.18■■□□□ 1.3
HCFC1P51610 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
HCFC1P51610 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.17■■□□□ 1.3
HCFC1P51610 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC23.17■■□□□ 1.3
HCFC1P51610 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1P51610 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HCFC1P51610 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
HCFC1P51610 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
HCFC1P51610 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC1P51610 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC1P51610 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
HCFC1P51610 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.15■■□□□ 1.3
HCFC1P51610 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.15■■□□□ 1.3
HCFC1P51610 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.15■■□□□ 1.3
HCFC1P51610 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.15■■□□□ 1.3
HCFC1P51610 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
HCFC1P51610 AC120057.4-201ENST00000624722 1615 ntBASIC23.14■■□□□ 1.29
HCFC1P51610 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.14■■□□□ 1.29
HCFC1P51610 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
HCFC1P51610 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.12■■□□□ 1.29
HCFC1P51610 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HCFC1P51610 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.11■■□□□ 1.29
HCFC1P51610 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC1P51610 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HCFC1P51610 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HCFC1P51610 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.09■■□□□ 1.29
HCFC1P51610 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC1P51610 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HCFC1P51610 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.08■■□□□ 1.29
HCFC1P51610 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
HCFC1P51610 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.07■■□□□ 1.28
HCFC1P51610 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
HCFC1P51610 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.06■■□□□ 1.28
HCFC1P51610 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
HCFC1P51610 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.04■■□□□ 1.28
HCFC1P51610 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
HCFC1P51610 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
HCFC1P51610 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.04■■□□□ 1.28
HCFC1P51610 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.04■■□□□ 1.28
HCFC1P51610 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HCFC1P51610 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
HCFC1P51610 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
HCFC1P51610 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
HCFC1P51610 LINC00273-201ENST00000539813 1452 ntBASIC23.02■■□□□ 1.28
HCFC1P51610 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
HCFC1P51610 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HCFC1P51610 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23■■□□□ 1.27
HCFC1P51610 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23■■□□□ 1.27
HCFC1P51610 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23■■□□□ 1.27
HCFC1P51610 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
HCFC1P51610 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23■■□□□ 1.27
HCFC1P51610 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
HCFC1P51610 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
HCFC1P51610 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
HCFC1P51610 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.98■■□□□ 1.27
HCFC1P51610 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.97■■□□□ 1.27
HCFC1P51610 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
HCFC1P51610 RARRES2P2-201ENST00000394842 485 ntBASIC22.97■■□□□ 1.27
HCFC1P51610 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
HCFC1P51610 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC1P51610 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC1P51610 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
HCFC1P51610 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
HCFC1P51610 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.94■■□□□ 1.26
HCFC1P51610 ABHD17AP5-201ENST00000580133 923 ntBASIC22.94■■□□□ 1.26
HCFC1P51610 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.94■■□□□ 1.26
HCFC1P51610 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
HCFC1P51610 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HCFC1P51610 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
HCFC1P51610 GPX1-201ENST00000419349 1106 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms