Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 HIS2YFR025C 1008 nt6.95□□□□□ -1.3
VPS55P47111 GSF2YML048W 1212 nt6.95□□□□□ -1.3
VPS55P47111 YOR325WYOR325W 474 nt6.95□□□□□ -1.3
VPS55P47111 PSD1YNL169C 1503 nt6.95□□□□□ -1.3
VPS55P47111 YDR455CYDR455C 309 nt6.94□□□□□ -1.3
VPS55P47111 ALD5YER073W 1563 nt6.94□□□□□ -1.3
VPS55P47111 ILV2YMR108W 2064 nt6.93□□□□□ -1.3
VPS55P47111 YBR232CYBR232C 360 nt6.93□□□□□ -1.3
VPS55P47111 ESBP6YNL125C 2022 nt6.93□□□□□ -1.3
VPS55P47111 ERG13YML126C 1476 nt6.92□□□□□ -1.3
VPS55P47111 SPS100YHR139C 981 nt6.92□□□□□ -1.3
VPS55P47111 ENT4YLL038C 744 nt6.92□□□□□ -1.3
VPS55P47111 TUB4YLR212C 1422 nt6.92□□□□□ -1.3
VPS55P47111 ADE8YDR408C 645 nt6.91□□□□□ -1.3
VPS55P47111 AIM1YAL046C 357 nt6.91□□□□□ -1.3
VPS55P47111 NAP1YKR048C 1254 nt6.9□□□□□ -1.3
VPS55P47111 SEN2YLR105C 1134 nt6.9□□□□□ -1.3
VPS55P47111 PAR32YDL173W 888 nt6.89□□□□□ -1.31
VPS55P47111 Q0182Q0182 405 nt6.89□□□□□ -1.31
VPS55P47111 DIG1YPL049C 1359 nt6.89□□□□□ -1.31
VPS55P47111 COQ8YGL119W 1506 nt6.89□□□□□ -1.31
VPS55P47111 YFR036W-AYFR036W-A 651 nt6.88□□□□□ -1.31
VPS55P47111 YJR114WYJR114W 393 nt6.88□□□□□ -1.31
VPS55P47111 TVP23YDR084C 600 nt6.87□□□□□ -1.31
VPS55P47111 BET2YPR176C 978 nt6.87□□□□□ -1.31
VPS55P47111 LSB6YJL100W 1824 nt6.86□□□□□ -1.31
VPS55P47111 NIF3YGL221C 867 nt6.86□□□□□ -1.31
VPS55P47111 YLR046CYLR046C 813 nt6.86□□□□□ -1.31
VPS55P47111 CYT1YOR065W 930 nt6.86□□□□□ -1.31
VPS55P47111 RFC1YOR217W 2586 nt6.85□□□□□ -1.31
VPS55P47111 APS2YJR058C 444 nt6.85□□□□□ -1.31
VPS55P47111 ABZ2YMR289W 1125 nt6.85□□□□□ -1.31
VPS55P47111 QDR2YIL121W 1629 nt6.85□□□□□ -1.31
VPS55P47111 ARO8YGL202W 1503 nt6.83□□□□□ -1.32
VPS55P47111 DMA2YNL116W 1569 nt6.82□□□□□ -1.32
VPS55P47111 GAL2YLR081W 1725 nt6.82□□□□□ -1.32
VPS55P47111 OPI3YJR073C 621 nt6.82□□□□□ -1.32
VPS55P47111 SAC7YDR389W 1965 nt6.82□□□□□ -1.32
VPS55P47111 YJL064WYJL064W 396 nt6.81□□□□□ -1.32
VPS55P47111 KES1YPL145C 1305 nt6.8□□□□□ -1.32
VPS55P47111 PAU19YMR325W 375 nt6.8□□□□□ -1.32
VPS55P47111 YNR064CYNR064C 873 nt6.8□□□□□ -1.32
VPS55P47111 SGA1YIL099W 1650 nt6.8□□□□□ -1.32
VPS55P47111 MTO1YGL236C 2010 nt6.79□□□□□ -1.32
VPS55P47111 KRE1YNL322C 942 nt6.79□□□□□ -1.32
VPS55P47111 TOK1YJL093C 2076 nt6.79□□□□□ -1.32
VPS55P47111 YHR218WYHR218W 1812 nt6.78□□□□□ -1.32
VPS55P47111 PUP1YOR157C 786 nt6.78□□□□□ -1.32
VPS55P47111 DTR1YBR180W 1719 nt6.78□□□□□ -1.32
VPS55P47111 ENO2YHR174W 1314 nt6.77□□□□□ -1.32
VPS55P47111 AMF1YOR378W 1548 nt6.77□□□□□ -1.33
VPS55P47111 ZAP1YJL056C 2643 nt6.77□□□□□ -1.33
VPS55P47111 IGD1YFR017C 588 nt6.77□□□□□ -1.33
VPS55P47111 DLD3YEL071W 1491 nt6.77□□□□□ -1.33
VPS55P47111 GID8YMR135C 1368 nt6.75□□□□□ -1.33
VPS55P47111 PCP1YGR101W 1041 nt6.75□□□□□ -1.33
VPS55P47111 YOR072WYOR072W 315 nt6.75□□□□□ -1.33
VPS55P47111 KEL3YPL263C 1956 nt6.75□□□□□ -1.33
VPS55P47111 FSH2YMR222C 672 nt6.74□□□□□ -1.33
VPS55P47111 THP3YPR045C 1413 nt6.74□□□□□ -1.33
VPS55P47111 ITR2YOL103W 1830 nt6.73□□□□□ -1.33
VPS55P47111 NAS2YIL007C 663 nt6.73□□□□□ -1.33
VPS55P47111 SPE2YOL052C 1191 nt6.73□□□□□ -1.33
VPS55P47111 MDL2YPL270W 2322 nt6.72□□□□□ -1.33
VPS55P47111 TPC1YGR096W 945 nt6.72□□□□□ -1.33
VPS55P47111 ELO1YJL196C 933 nt6.72□□□□□ -1.33
VPS55P47111 VMA11YPL234C 495 nt6.72□□□□□ -1.33
VPS55P47111 LEU2YCL018W 1095 nt6.72□□□□□ -1.33
VPS55P47111 CDD1YLR245C 429 nt6.71□□□□□ -1.34
VPS55P47111 TIP1YBR067C 633 nt6.71□□□□□ -1.34
VPS55P47111 snR31snR31 225 nt6.71□□□□□ -1.34
VPS55P47111 YHR219WYHR219W 1875 nt6.7□□□□□ -1.34
VPS55P47111 RPN14YGL004C 1254 nt6.7□□□□□ -1.34
VPS55P47111 HAP5YOR358W 729 nt6.7□□□□□ -1.34
VPS55P47111 YKL133CYKL133C 1392 nt6.69□□□□□ -1.34
VPS55P47111 YMR265CYMR265C 1386 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)DtA(AGC)D 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)FtA(AGC)F 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)GtA(AGC)G 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)HtA(AGC)H 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)JtA(AGC)J 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)K1tA(AGC)K1 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)K2tA(AGC)K2 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)LtA(AGC)L 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)M1tA(AGC)M1 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)M2tA(AGC)M2 73 nt6.69□□□□□ -1.34
VPS55P47111 tA(AGC)PtA(AGC)P 73 nt6.69□□□□□ -1.34
VPS55P47111 TIM44YIL022W 1296 nt6.69□□□□□ -1.34
VPS55P47111 SWT21YNL187W 1074 nt6.69□□□□□ -1.34
VPS55P47111 IPL1YPL209C 1104 nt6.69□□□□□ -1.34
VPS55P47111 MRS6YOR370C 1812 nt6.69□□□□□ -1.34
VPS55P47111 RPD3YNL330C 1302 nt6.68□□□□□ -1.34
VPS55P47111 MEX67YPL169C 1800 nt6.67□□□□□ -1.34
VPS55P47111 LSR1LSR1 1175 nt6.67□□□□□ -1.34
VPS55P47111 ODC1YPL134C 933 nt6.67□□□□□ -1.34
VPS55P47111 SUV3YPL029W 2214 nt6.66□□□□□ -1.34
VPS55P47111 YCR025CYCR025C 411 nt6.66□□□□□ -1.34
VPS55P47111 FLX1YIL134W 936 nt6.66□□□□□ -1.34
VPS55P47111 SLG1YOR008C 1137 nt6.66□□□□□ -1.34
VPS55P47111 SFL1YOR140W 2301 nt6.66□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 238 ms