Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 BNI5YNL166C 1347 nt7.9□□□□□ -1.14
LSM1P47017 APT2YDR441C 546 nt7.89□□□□□ -1.15
LSM1P47017 NUC1YJL208C 990 nt7.89□□□□□ -1.15
LSM1P47017 GNP1YDR508C 1992 nt7.89□□□□□ -1.15
LSM1P47017 YLR046CYLR046C 813 nt7.88□□□□□ -1.15
LSM1P47017 YLR279WYLR279W 390 nt7.88□□□□□ -1.15
LSM1P47017 AIM1YAL046C 357 nt7.87□□□□□ -1.15
LSM1P47017 MET30YIL046W 1923 nt7.87□□□□□ -1.15
LSM1P47017 THI6YPL214C 1623 nt7.86□□□□□ -1.15
LSM1P47017 HEM13YDR044W 987 nt7.86□□□□□ -1.15
LSM1P47017 LSM5YER146W 282 nt7.86□□□□□ -1.15
LSM1P47017 MSC1YML128C 1542 nt7.86□□□□□ -1.15
LSM1P47017 YDR510C-AYDR510C-A 117 nt7.85□□□□□ -1.15
LSM1P47017 ENT4YLL038C 744 nt7.85□□□□□ -1.15
LSM1P47017 YNL190WYNL190W 615 nt7.85□□□□□ -1.15
LSM1P47017 FUB1YCR076C 753 nt7.84□□□□□ -1.15
LSM1P47017 YGR012WYGR012W 1182 nt7.84□□□□□ -1.15
LSM1P47017 RAS2YNL098C 969 nt7.84□□□□□ -1.15
LSM1P47017 DLD3YEL071W 1491 nt7.83□□□□□ -1.16
LSM1P47017 MSB4YOL112W 1479 nt7.83□□□□□ -1.16
LSM1P47017 ASP3-1YLR155C 1089 nt7.82□□□□□ -1.16
LSM1P47017 ASP3-2YLR157C 1089 nt7.82□□□□□ -1.16
LSM1P47017 ASP3-3YLR158C 1089 nt7.82□□□□□ -1.16
LSM1P47017 ASP3-4YLR160C 1089 nt7.82□□□□□ -1.16
LSM1P47017 RIM2YBR192W 1134 nt7.82□□□□□ -1.16
LSM1P47017 KRR1YCL059C 951 nt7.81□□□□□ -1.16
LSM1P47017 RPC31YNL151C 756 nt7.81□□□□□ -1.16
LSM1P47017 ORT1YOR130C 879 nt7.81□□□□□ -1.16
LSM1P47017 DUR3YHL016C 2208 nt7.8□□□□□ -1.16
LSM1P47017 FCY21YER060W 1587 nt7.8□□□□□ -1.16
LSM1P47017 FET5YFL041W 1869 nt7.79□□□□□ -1.16
LSM1P47017 SOL2YCR073W-A 948 nt7.79□□□□□ -1.16
LSM1P47017 GPN2YOR262W 1044 nt7.79□□□□□ -1.16
LSM1P47017 TIP1YBR067C 633 nt7.79□□□□□ -1.16
LSM1P47017 POP2YNR052C 1302 nt7.78□□□□□ -1.16
LSM1P47017 YPL222C-AYPL222C-A 246 nt7.78□□□□□ -1.16
LSM1P47017 ADE16YLR028C 1776 nt7.77□□□□□ -1.17
LSM1P47017 GCD11YER025W 1584 nt7.77□□□□□ -1.17
LSM1P47017 DUS3YLR401C 2007 nt7.77□□□□□ -1.17
LSM1P47017 VMA11YPL234C 495 nt7.76□□□□□ -1.17
LSM1P47017 SNU66YOR308C 1764 nt7.76□□□□□ -1.17
LSM1P47017 GND1YHR183W 1470 nt7.75□□□□□ -1.17
LSM1P47017 LEU4YNL104C 1860 nt7.75□□□□□ -1.17
LSM1P47017 PRY1YJL079C 900 nt7.75□□□□□ -1.17
LSM1P47017 ADE2YOR128C 1716 nt7.75□□□□□ -1.17
LSM1P47017 HXT12YIL170W 1374 nt7.74□□□□□ -1.17
LSM1P47017 LAS17YOR181W 1902 nt7.74□□□□□ -1.17
LSM1P47017 CSM1YCR086W 573 nt7.74□□□□□ -1.17
LSM1P47017 snR4snR4 186 nt7.74□□□□□ -1.17
LSM1P47017 TAT2YOL020W 1779 nt7.74□□□□□ -1.17
LSM1P47017 DPL1YDR294C 1770 nt7.72□□□□□ -1.17
LSM1P47017 OYE2YHR179W 1203 nt7.72□□□□□ -1.17
LSM1P47017 NPP2YEL016C 1482 nt7.72□□□□□ -1.17
LSM1P47017 RAD23YEL037C 1197 nt7.71□□□□□ -1.18
LSM1P47017 ECM10YEL030W 1935 nt7.71□□□□□ -1.18
LSM1P47017 RPT5YOR117W 1305 nt7.71□□□□□ -1.18
LSM1P47017 YIL177CYIL177C 5277 nt7.7□□□□□ -1.18
LSM1P47017 YRF1-3YGR296W 5580 nt7.7□□□□□ -1.18
LSM1P47017 YRF1-6YNL339C 5580 nt7.7□□□□□ -1.18
LSM1P47017 YRF1-7YPL283C 5580 nt7.7□□□□□ -1.18
LSM1P47017 YRF1-1YDR545W 5391 nt7.69□□□□□ -1.18
LSM1P47017 YRF1-5YLR467W 5391 nt7.69□□□□□ -1.18
LSM1P47017 YRF1-8YOR396W 5391 nt7.69□□□□□ -1.18
LSM1P47017 SMM1YNR015W 1155 nt7.69□□□□□ -1.18
LSM1P47017 ITR2YOL103W 1830 nt7.68□□□□□ -1.18
LSM1P47017 YLR111WYLR111W 333 nt7.68□□□□□ -1.18
LSM1P47017 SNX3YOR357C 489 nt7.68□□□□□ -1.18
LSM1P47017 FRT1YOR324C 1809 nt7.68□□□□□ -1.18
LSM1P47017 EAF3YPR023C 1206 nt7.67□□□□□ -1.18
LSM1P47017 PFS2YNL317W 1398 nt7.67□□□□□ -1.18
LSM1P47017 TRP2YER090W 1524 nt7.67□□□□□ -1.18
LSM1P47017 ADE5,7YGL234W 2409 nt7.67□□□□□ -1.18
LSM1P47017 YDR467CYDR467C 327 nt7.66□□□□□ -1.18
LSM1P47017 ERG13YML126C 1476 nt7.65□□□□□ -1.18
LSM1P47017 MAM3YOL060C 2121 nt7.65□□□□□ -1.18
LSM1P47017 HXT11YOL156W 1704 nt7.64□□□□□ -1.19
LSM1P47017 YDR455CYDR455C 309 nt7.64□□□□□ -1.19
LSM1P47017 YJL118WYJL118W 660 nt7.64□□□□□ -1.19
LSM1P47017 NDE1YMR145C 1683 nt7.63□□□□□ -1.19
LSM1P47017 GGC1YDL198C 903 nt7.63□□□□□ -1.19
LSM1P47017 tE(CUC)DtE(CUC)D 72 nt7.63□□□□□ -1.19
LSM1P47017 tE(CUC)ItE(CUC)I 72 nt7.63□□□□□ -1.19
LSM1P47017 TPS1YBR126C 1488 nt7.62□□□□□ -1.19
LSM1P47017 YDR306CYDR306C 1437 nt7.62□□□□□ -1.19
LSM1P47017 HSV2YGR223C 1347 nt7.62□□□□□ -1.19
LSM1P47017 RIB7YBR153W 735 nt7.62□□□□□ -1.19
LSM1P47017 DDI1YER143W 1287 nt7.61□□□□□ -1.19
LSM1P47017 LOT5YKL183W 921 nt7.61□□□□□ -1.19
LSM1P47017 PMA2YPL036W 2844 nt7.61□□□□□ -1.19
LSM1P47017 SAM3YPL274W 1764 nt7.61□□□□□ -1.19
LSM1P47017 LSB3YFR024C-A 1380 nt7.6□□□□□ -1.19
LSM1P47017 RIB3YDR487C 627 nt7.6□□□□□ -1.19
LSM1P47017 EMC3YKL207W 762 nt7.6□□□□□ -1.19
LSM1P47017 BEM1YBR200W 1656 nt7.6□□□□□ -1.19
LSM1P47017 VRG4YGL225W 1014 nt7.59□□□□□ -1.19
LSM1P47017 DIA4YHR011W 1341 nt7.58□□□□□ -1.2
LSM1P47017 SLM3YDL033C 1254 nt7.58□□□□□ -1.2
LSM1P47017 RPN14YGL004C 1254 nt7.58□□□□□ -1.2
LSM1P47017 AIM34YMR003W 597 nt7.58□□□□□ -1.2
LSM1P47017 CTF3YLR381W 2202 nt7.58□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms