Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 TGA1tA(UGC)A 73 nt12.38□□□□□ -0.43
VMR1P38735 tA(UGC)EtA(UGC)E 73 nt12.38□□□□□ -0.43
VMR1P38735 tA(UGC)GtA(UGC)G 73 nt12.38□□□□□ -0.43
VMR1P38735 tA(UGC)LtA(UGC)L 73 nt12.38□□□□□ -0.43
VMR1P38735 tA(UGC)OtA(UGC)O 73 nt12.38□□□□□ -0.43
VMR1P38735 ADH3YMR083W 1128 nt12.38□□□□□ -0.43
VMR1P38735 PHB2YGR231C 933 nt12.37□□□□□ -0.43
VMR1P38735 ERG13YML126C 1476 nt12.32□□□□□ -0.44
VMR1P38735 THP3YPR045C 1413 nt12.32□□□□□ -0.44
VMR1P38735 ZRT3YKL175W 1512 nt12.3□□□□□ -0.44
VMR1P38735 FCY1YPR062W 477 nt12.29□□□□□ -0.44
VMR1P38735 CWC15YDR163W 528 nt12.28□□□□□ -0.44
VMR1P38735 ACH1YBL015W 1581 nt12.25□□□□□ -0.45
VMR1P38735 MOB1YIL106W 945 nt12.24□□□□□ -0.45
VMR1P38735 YMR007WYMR007W 381 nt12.23□□□□□ -0.45
VMR1P38735 YOR343CYOR343C 327 nt12.22□□□□□ -0.45
VMR1P38735 PAU21YOR394W 495 nt12.22□□□□□ -0.45
VMR1P38735 PAU22YPL282C 495 nt12.22□□□□□ -0.45
VMR1P38735 OPI3YJR073C 621 nt12.2□□□□□ -0.46
VMR1P38735 ENO2YHR174W 1314 nt12.2□□□□□ -0.46
VMR1P38735 RPL12BYDR418W 498 nt12.19□□□□□ -0.46
VMR1P38735 PCP1YGR101W 1041 nt12.19□□□□□ -0.46
VMR1P38735 SER2YGR208W 930 nt12.19□□□□□ -0.46
VMR1P38735 AIM1YAL046C 357 nt12.18□□□□□ -0.46
VMR1P38735 ASP3-1YLR155C 1089 nt12.17□□□□□ -0.46
VMR1P38735 ASP3-2YLR157C 1089 nt12.17□□□□□ -0.46
VMR1P38735 ASP3-3YLR158C 1089 nt12.17□□□□□ -0.46
VMR1P38735 ASP3-4YLR160C 1089 nt12.17□□□□□ -0.46
VMR1P38735 GRH1YDR517W 1119 nt12.14□□□□□ -0.47
VMR1P38735 MFG1YDL233W 1377 nt12.14□□□□□ -0.47
VMR1P38735 YNR064CYNR064C 873 nt12.13□□□□□ -0.47
VMR1P38735 TPC1YGR096W 945 nt12.12□□□□□ -0.47
VMR1P38735 YAL016C-AYAL016C-A 315 nt12.12□□□□□ -0.47
VMR1P38735 RCR1YBR005W 642 nt12.12□□□□□ -0.47
VMR1P38735 BET2YPR176C 978 nt12.12□□□□□ -0.47
VMR1P38735 RRT8YOL048C 1029 nt12.11□□□□□ -0.47
VMR1P38735 HTS1YPR033C 1641 nt12.11□□□□□ -0.47
VMR1P38735 TVP23YDR084C 600 nt12.09□□□□□ -0.47
VMR1P38735 KAE1YKR038C 1161 nt12.09□□□□□ -0.47
VMR1P38735 DIG1YPL049C 1359 nt12.09□□□□□ -0.47
VMR1P38735 SAC7YDR389W 1965 nt12.07□□□□□ -0.48
VMR1P38735 ELO1YJL196C 933 nt12.07□□□□□ -0.48
VMR1P38735 NAM8YHR086W 1572 nt12.06□□□□□ -0.48
VMR1P38735 FSH2YMR222C 672 nt12.05□□□□□ -0.48
VMR1P38735 YOR268CYOR268C 399 nt12.05□□□□□ -0.48
VMR1P38735 PBP1YGR178C 2169 nt12.05□□□□□ -0.48
VMR1P38735 ERO1YML130C 1692 nt12.05□□□□□ -0.48
VMR1P38735 SDS24YBR214W 1584 nt12.04□□□□□ -0.48
VMR1P38735 YKR012CYKR012C 378 nt12.04□□□□□ -0.48
VMR1P38735 SRP102YKL154W 735 nt12.03□□□□□ -0.48
VMR1P38735 YAT1YAR035W 2064 nt12.02□□□□□ -0.48
VMR1P38735 ALG12YNR030W 1656 nt12.02□□□□□ -0.48
VMR1P38735 HRA1HRA1 564 nt12.02□□□□□ -0.49
VMR1P38735 HOG1YLR113W 1308 nt12.02□□□□□ -0.49
VMR1P38735 PET18YCR020C 648 nt12.01□□□□□ -0.49
VMR1P38735 REX2YLR059C 810 nt12.01□□□□□ -0.49
VMR1P38735 AMF1YOR378W 1548 nt12.01□□□□□ -0.49
VMR1P38735 NAR1YNL240C 1476 nt12□□□□□ -0.49
VMR1P38735 CYC3YAL039C 810 nt12□□□□□ -0.49
VMR1P38735 EMC3YKL207W 762 nt12□□□□□ -0.49
VMR1P38735 YMR206WYMR206W 942 nt11.99□□□□□ -0.49
VMR1P38735 VPS62YGR141W 1404 nt11.99□□□□□ -0.49
VMR1P38735 tL(UAA)B1tL(UAA)B1 84 nt11.98□□□□□ -0.49
VMR1P38735 tL(UAA)B2tL(UAA)B2 84 nt11.98□□□□□ -0.49
VMR1P38735 tL(UAA)DtL(UAA)D 84 nt11.98□□□□□ -0.49
VMR1P38735 SUP51tL(UAA)J 84 nt11.98□□□□□ -0.49
VMR1P38735 tL(UAA)KtL(UAA)K 84 nt11.98□□□□□ -0.49
VMR1P38735 tL(UAA)LtL(UAA)L 84 nt11.98□□□□□ -0.49
VMR1P38735 tL(UAA)NtL(UAA)N 84 nt11.98□□□□□ -0.49
VMR1P38735 YGR210CYGR210C 1236 nt11.96□□□□□ -0.5
VMR1P38735 YJL160CYJL160C 864 nt11.96□□□□□ -0.5
VMR1P38735 CYT2YKL087C 675 nt11.94□□□□□ -0.5
VMR1P38735 YLR280CYLR280C 351 nt11.94□□□□□ -0.5
VMR1P38735 TOS1YBR162C 1368 nt11.92□□□□□ -0.5
VMR1P38735 UTR5YEL035C 501 nt11.91□□□□□ -0.5
VMR1P38735 EDC2YER035W 438 nt11.9□□□□□ -0.5
VMR1P38735 SWT21YNL187W 1074 nt11.9□□□□□ -0.5
VMR1P38735 YMR210WYMR210W 1350 nt11.9□□□□□ -0.5
VMR1P38735 ENO1YGR254W 1314 nt11.9□□□□□ -0.51
VMR1P38735 LEU2YCL018W 1095 nt11.89□□□□□ -0.51
VMR1P38735 CCT2YIL142W 1584 nt11.89□□□□□ -0.51
VMR1P38735 YDL086WYDL086W 822 nt11.88□□□□□ -0.51
VMR1P38735 YOR325WYOR325W 474 nt11.88□□□□□ -0.51
VMR1P38735 ELP4YPL101W 1371 nt11.88□□□□□ -0.51
VMR1P38735 SFL1YOR140W 2301 nt11.88□□□□□ -0.51
VMR1P38735 VBA3YCL069W 1377 nt11.87□□□□□ -0.51
VMR1P38735 YIL100C-AYIL100C-A 339 nt11.85□□□□□ -0.51
VMR1P38735 YLR046CYLR046C 813 nt11.85□□□□□ -0.51
VMR1P38735 YPL108WYPL108W 507 nt11.85□□□□□ -0.51
VMR1P38735 OPI10YOL032W 741 nt11.84□□□□□ -0.51
VMR1P38735 LSB6YJL100W 1824 nt11.83□□□□□ -0.52
VMR1P38735 YKL053WYKL053W 375 nt11.8□□□□□ -0.52
VMR1P38735 MET1YKR069W 1782 nt11.8□□□□□ -0.52
VMR1P38735 ITR2YOL103W 1830 nt11.8□□□□□ -0.52
VMR1P38735 BAP3YDR046C 1815 nt11.78□□□□□ -0.52
VMR1P38735 SDH8YBR269C 417 nt11.78□□□□□ -0.52
VMR1P38735 NVJ2YPR091C 2313 nt11.77□□□□□ -0.52
VMR1P38735 YPL247CYPL247C 1572 nt11.76□□□□□ -0.53
VMR1P38735 ADA2YDR448W 1305 nt11.75□□□□□ -0.53
VMR1P38735 PRE5YMR314W 705 nt11.75□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 26.2 ms