Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.22■■□□□ 1.95
COL4A2P08572 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL4A2P08572 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL4A2P08572 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL4A2P08572 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
COL4A2P08572 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L13-201ENST00000554103 1267 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L15-201ENST00000611059 1267 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L23-201ENST00000615195 1269 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L24-201ENST00000617576 1269 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L22-201ENST00000618238 1269 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L20-201ENST00000619712 1269 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L21-201ENST00000622058 1269 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L10-201ENST00000622460 1267 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 DUX4L25-201ENST00000624915 1269 ntBASIC27.21■■□□□ 1.95
COL4A2P08572 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.2■■□□□ 1.95
COL4A2P08572 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
COL4A2P08572 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.2■■□□□ 1.94
COL4A2P08572 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
COL4A2P08572 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL4A2P08572 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL4A2P08572 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL4A2P08572 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL4A2P08572 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.18■■□□□ 1.94
COL4A2P08572 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL4A2P08572 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL4A2P08572 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.17■■□□□ 1.94
COL4A2P08572 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.16■■□□□ 1.94
COL4A2P08572 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.15■■□□□ 1.94
COL4A2P08572 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.15■■□□□ 1.94
COL4A2P08572 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL4A2P08572 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL4A2P08572 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL4A2P08572 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL4A2P08572 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.12■■□□□ 1.93
COL4A2P08572 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
COL4A2P08572 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL4A2P08572 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.11■■□□□ 1.93
COL4A2P08572 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
COL4A2P08572 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
COL4A2P08572 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.08■■□□□ 1.93
COL4A2P08572 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.08■■□□□ 1.93
COL4A2P08572 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.08■■□□□ 1.93
COL4A2P08572 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.07■■□□□ 1.92
COL4A2P08572 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.07■■□□□ 1.92
COL4A2P08572 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL4A2P08572 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL4A2P08572 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL4A2P08572 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A2P08572 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL4A2P08572 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.05■■□□□ 1.92
COL4A2P08572 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.04■■□□□ 1.92
COL4A2P08572 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.04■■□□□ 1.92
COL4A2P08572 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.04■■□□□ 1.92
COL4A2P08572 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL4A2P08572 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.03■■□□□ 1.92
COL4A2P08572 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL4A2P08572 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
COL4A2P08572 LINC00273-201ENST00000539813 1452 ntBASIC27.01■■□□□ 1.91
COL4A2P08572 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL4A2P08572 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL4A2P08572 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL4A2P08572 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27■■□□□ 1.91
COL4A2P08572 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
COL4A2P08572 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL4A2P08572 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL4A2P08572 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
COL4A2P08572 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.98■■□□□ 1.91
COL4A2P08572 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL4A2P08572 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.96■■□□□ 1.91
COL4A2P08572 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL4A2P08572 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
COL4A2P08572 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
COL4A2P08572 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
COL4A2P08572 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
COL4A2P08572 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
COL4A2P08572 RARRES2P2-201ENST00000394842 485 ntBASIC26.92■■□□□ 1.9
COL4A2P08572 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
COL4A2P08572 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
COL4A2P08572 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
COL4A2P08572 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
COL4A2P08572 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
COL4A2P08572 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.9■■□□□ 1.9
COL4A2P08572 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
COL4A2P08572 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
COL4A2P08572 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
COL4A2P08572 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
COL4A2P08572 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.88■■□□□ 1.89
COL4A2P08572 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.87■■□□□ 1.89
COL4A2P08572 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.87■■□□□ 1.89
COL4A2P08572 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms