Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Abcd4O89016 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Abcd4O89016 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Abcd4O89016 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Abcd4O89016 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Abcd4O89016 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Abcd4O89016 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Abcd4O89016 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Abcd4O89016 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Abcd4O89016 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.8■■□□□ 1.08
Abcd4O89016 Nkain2-201ENSMUST00000092602 558 ntBASIC21.8■■□□□ 1.08
Abcd4O89016 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Abcd4O89016 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Abcd4O89016 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Abcd4O89016 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Abcd4O89016 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Abcd4O89016 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Abcd4O89016 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Abcd4O89016 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Abcd4O89016 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Abcd4O89016 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Abcd4O89016 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Abcd4O89016 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Abcd4O89016 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Abcd4O89016 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Abcd4O89016 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Abcd4O89016 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcd4O89016 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcd4O89016 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.76■■□□□ 1.07
Abcd4O89016 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcd4O89016 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Abcd4O89016 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abcd4O89016 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Abcd4O89016 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Abcd4O89016 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Abcd4O89016 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abcd4O89016 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.73■■□□□ 1.07
Abcd4O89016 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Abcd4O89016 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Abcd4O89016 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcd4O89016 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Abcd4O89016 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Abcd4O89016 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Abcd4O89016 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.71■■□□□ 1.07
Abcd4O89016 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Abcd4O89016 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.7■■□□□ 1.06
Abcd4O89016 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.7■■□□□ 1.06
Abcd4O89016 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Abcd4O89016 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Abcd4O89016 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Abcd4O89016 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.69■■□□□ 1.06
Abcd4O89016 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.68■■□□□ 1.06
Abcd4O89016 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Abcd4O89016 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Abcd4O89016 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Abcd4O89016 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Abcd4O89016 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Abcd4O89016 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.66■■□□□ 1.06
Abcd4O89016 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Abcd4O89016 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Abcd4O89016 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Abcd4O89016 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Abcd4O89016 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Abcd4O89016 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Abcd4O89016 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Abcd4O89016 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Abcd4O89016 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Abcd4O89016 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Abcd4O89016 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Abcd4O89016 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Abcd4O89016 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Abcd4O89016 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Abcd4O89016 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.59■■□□□ 1.05
Abcd4O89016 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Abcd4O89016 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Abcd4O89016 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Abcd4O89016 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.57■■□□□ 1.04
Abcd4O89016 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Abcd4O89016 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Abcd4O89016 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Abcd4O89016 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcd4O89016 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Abcd4O89016 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcd4O89016 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Abcd4O89016 Amer2-203ENSMUST00000225247 2662 ntBASIC21.54■■□□□ 1.04
Abcd4O89016 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Abcd4O89016 Gm7432-201ENSMUST00000210343 879 ntBASIC21.54■■□□□ 1.04
Abcd4O89016 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcd4O89016 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Abcd4O89016 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Abcd4O89016 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.53■■□□□ 1.04
Abcd4O89016 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcd4O89016 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Abcd4O89016 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.5■■□□□ 1.03
Abcd4O89016 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Abcd4O89016 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Abcd4O89016 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Abcd4O89016 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Abcd4O89016 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Abcd4O89016 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 1120.2 ms