Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Trim34bJ3QNR8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Trim34bJ3QNR8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Trim34bJ3QNR8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30,31■■■□□ 2,44
Trim34bJ3QNR8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30,31■■■□□ 2,44
Trim34bJ3QNR8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30,3■■■□□ 2,44
Trim34bJ3QNR8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30,3■■■□□ 2,44
Trim34bJ3QNR8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30,29■■■□□ 2,44
Trim34bJ3QNR8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30,29■■■□□ 2,44
Trim34bJ3QNR8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30,27■■■□□ 2,44
Trim34bJ3QNR8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30,27■■■□□ 2,44
Trim34bJ3QNR8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Trim34bJ3QNR8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30,25■■■□□ 2,43
Trim34bJ3QNR8 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30,24■■■□□ 2,43
Trim34bJ3QNR8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30,23■■■□□ 2,43
Trim34bJ3QNR8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30,23■■■□□ 2,43
Trim34bJ3QNR8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Trim34bJ3QNR8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30,2■■■□□ 2,43
Trim34bJ3QNR8 Gm7432-201ENSMUST00000210343 879 ntBASIC30,2■■■□□ 2,43
Trim34bJ3QNR8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Trim34bJ3QNR8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Trim34bJ3QNR8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30,19■■■□□ 2,42
Trim34bJ3QNR8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30,19■■■□□ 2,42
Trim34bJ3QNR8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30,18■■■□□ 2,42
Trim34bJ3QNR8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Trim34bJ3QNR8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30,16■■■□□ 2,42
Trim34bJ3QNR8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30,15■■■□□ 2,42
Trim34bJ3QNR8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30,14■■■□□ 2,42
Trim34bJ3QNR8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30,14■■■□□ 2,42
Trim34bJ3QNR8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30,14■■■□□ 2,42
Trim34bJ3QNR8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30,12■■■□□ 2,41
Trim34bJ3QNR8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30,11■■■□□ 2,41
Trim34bJ3QNR8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Trim34bJ3QNR8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30,1■■■□□ 2,41
Trim34bJ3QNR8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30,1■■■□□ 2,41
Trim34bJ3QNR8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30,08■■■□□ 2,41
Trim34bJ3QNR8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30,08■■■□□ 2,41
Trim34bJ3QNR8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30,08■■■□□ 2,41
Trim34bJ3QNR8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30,08■■■□□ 2,41
Trim34bJ3QNR8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,08■■■□□ 2,41
Trim34bJ3QNR8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30,07■■■□□ 2,4
Trim34bJ3QNR8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Trim34bJ3QNR8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30,06■■■□□ 2,4
Trim34bJ3QNR8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30,06■■■□□ 2,4
Trim34bJ3QNR8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30,06■■■□□ 2,4
Trim34bJ3QNR8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30,05■■■□□ 2,4
Trim34bJ3QNR8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30,05■■■□□ 2,4
Trim34bJ3QNR8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30,05■■■□□ 2,4
Trim34bJ3QNR8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30,04■■■□□ 2,4
Trim34bJ3QNR8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30,04■■■□□ 2,4
Trim34bJ3QNR8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30,04■■■□□ 2,4
Trim34bJ3QNR8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30,03■■■□□ 2,4
Trim34bJ3QNR8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30,03■■■□□ 2,4
Trim34bJ3QNR8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30,02■■■□□ 2,4
Trim34bJ3QNR8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30,01■■■□□ 2,39
Trim34bJ3QNR8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30,01■■■□□ 2,39
Trim34bJ3QNR8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30■■■□□ 2,39
Trim34bJ3QNR8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2,39
Trim34bJ3QNR8 Gm11599-201ENSMUST00000118720 878 ntBASIC29,99■■■□□ 2,39
Trim34bJ3QNR8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29,99■■■□□ 2,39
Trim34bJ3QNR8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Trim34bJ3QNR8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Trim34bJ3QNR8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29,98■■■□□ 2,39
Trim34bJ3QNR8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Trim34bJ3QNR8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29,97■■■□□ 2,39
Trim34bJ3QNR8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29,97■■■□□ 2,39
Trim34bJ3QNR8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29,96■■■□□ 2,39
Trim34bJ3QNR8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29,96■■■□□ 2,39
Trim34bJ3QNR8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29,96■■■□□ 2,39
Trim34bJ3QNR8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29,96■■■□□ 2,39
Trim34bJ3QNR8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,39
Trim34bJ3QNR8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29,95■■■□□ 2,39
Trim34bJ3QNR8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29,95■■■□□ 2,38
Trim34bJ3QNR8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Trim34bJ3QNR8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29,94■■■□□ 2,38
Trim34bJ3QNR8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29,94■■■□□ 2,38
Trim34bJ3QNR8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29,93■■■□□ 2,38
Trim34bJ3QNR8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Trim34bJ3QNR8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29,91■■■□□ 2,38
Trim34bJ3QNR8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29,91■■■□□ 2,38
Trim34bJ3QNR8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Trim34bJ3QNR8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Trim34bJ3QNR8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29,89■■■□□ 2,38
Trim34bJ3QNR8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29,88■■■□□ 2,37
Trim34bJ3QNR8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29,88■■■□□ 2,37
Trim34bJ3QNR8 Gm30023-201ENSMUST00000197970 889 ntBASIC29,86■■■□□ 2,37
Trim34bJ3QNR8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29,86■■■□□ 2,37
Trim34bJ3QNR8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29,85■■■□□ 2,37
Trim34bJ3QNR8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Trim34bJ3QNR8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29,84■■■□□ 2,37
Trim34bJ3QNR8 Pcf11-205ENSMUST00000208255 1720 ntBASIC29,84■■■□□ 2,37
Trim34bJ3QNR8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29,83■■■□□ 2,37
Trim34bJ3QNR8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29,83■■■□□ 2,37
Trim34bJ3QNR8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29,83■■■□□ 2,37
Trim34bJ3QNR8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29,83■■■□□ 2,37
Trim34bJ3QNR8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29,83■■■□□ 2,37
Trim34bJ3QNR8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Trim34bJ3QNR8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29,82■■■□□ 2,36
Trim34bJ3QNR8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29,81■■■□□ 2,36
Trim34bJ3QNR8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Retrieved 100 of 76,532 protein–RNA pairs in 41,4 ms