Protein–RNA interactions for Protein: A0A087WQ54

Gm28285, Predicted gene 28285 (Fragment), mousemouse

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28285A0A087WQ54 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Gm28285A0A087WQ54 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm28285A0A087WQ54 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Gm28285A0A087WQ54 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Gm28285A0A087WQ54 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28285A0A087WQ54 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28285A0A087WQ54 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28285A0A087WQ54 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Gm28285A0A087WQ54 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Gm28285A0A087WQ54 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28285A0A087WQ54 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28285A0A087WQ54 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm28285A0A087WQ54 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28285A0A087WQ54 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28285A0A087WQ54 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm28285A0A087WQ54 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm28285A0A087WQ54 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Gm28285A0A087WQ54 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28285A0A087WQ54 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm28285A0A087WQ54 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm28285A0A087WQ54 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.74■□□□□ 0.75
Gm28285A0A087WQ54 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm28285A0A087WQ54 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28285A0A087WQ54 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm28285A0A087WQ54 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28285A0A087WQ54 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm28285A0A087WQ54 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Gm28285A0A087WQ54 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28285A0A087WQ54 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28285A0A087WQ54 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28285A0A087WQ54 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28285A0A087WQ54 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28285A0A087WQ54 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm28285A0A087WQ54 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.7■□□□□ 0.74
Gm28285A0A087WQ54 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28285A0A087WQ54 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm28285A0A087WQ54 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gm28285A0A087WQ54 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28285A0A087WQ54 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28285A0A087WQ54 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28285A0A087WQ54 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm28285A0A087WQ54 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gm28285A0A087WQ54 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28285A0A087WQ54 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28285A0A087WQ54 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gm28285A0A087WQ54 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gm28285A0A087WQ54 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Gm28285A0A087WQ54 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.66■□□□□ 0.74
Gm28285A0A087WQ54 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28285A0A087WQ54 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gm28285A0A087WQ54 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Gm28285A0A087WQ54 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Gm28285A0A087WQ54 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28285A0A087WQ54 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28285A0A087WQ54 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Gm28285A0A087WQ54 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28285A0A087WQ54 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Gm28285A0A087WQ54 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28285A0A087WQ54 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Gm28285A0A087WQ54 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Gm28285A0A087WQ54 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Gm28285A0A087WQ54 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Gm28285A0A087WQ54 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28285A0A087WQ54 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.59■□□□□ 0.73
Gm28285A0A087WQ54 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.59■□□□□ 0.73
Gm28285A0A087WQ54 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28285A0A087WQ54 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28285A0A087WQ54 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Gm28285A0A087WQ54 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Gm28285A0A087WQ54 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Gm28285A0A087WQ54 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm28285A0A087WQ54 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.57■□□□□ 0.72
Gm28285A0A087WQ54 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28285A0A087WQ54 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28285A0A087WQ54 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm28285A0A087WQ54 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Gm28285A0A087WQ54 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm28285A0A087WQ54 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm28285A0A087WQ54 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28285A0A087WQ54 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28285A0A087WQ54 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Gm28285A0A087WQ54 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28285A0A087WQ54 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28285A0A087WQ54 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28285A0A087WQ54 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.54■□□□□ 0.72
Gm28285A0A087WQ54 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm28285A0A087WQ54 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Gm28285A0A087WQ54 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.51■□□□□ 0.71
Gm28285A0A087WQ54 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28285A0A087WQ54 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28285A0A087WQ54 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm28285A0A087WQ54 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Gm28285A0A087WQ54 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms