Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.11■□□□□ 0.33
Trav13-1A0A075B644 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13-1A0A075B644 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13-1A0A075B644 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13-1A0A075B644 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav13-1A0A075B644 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav13-1A0A075B644 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13-1A0A075B644 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13-1A0A075B644 Gm8503-201ENSMUST00000118131 455 ntBASIC17.09■□□□□ 0.33
Trav13-1A0A075B644 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav13-1A0A075B644 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.09■□□□□ 0.33
Trav13-1A0A075B644 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.08■□□□□ 0.32
Trav13-1A0A075B644 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav13-1A0A075B644 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.08■□□□□ 0.32
Trav13-1A0A075B644 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-1A0A075B644 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav13-1A0A075B644 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav13-1A0A075B644 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav13-1A0A075B644 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-1A0A075B644 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-1A0A075B644 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav13-1A0A075B644 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13-1A0A075B644 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav13-1A0A075B644 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13-1A0A075B644 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13-1A0A075B644 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13-1A0A075B644 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-1A0A075B644 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trav13-1A0A075B644 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13-1A0A075B644 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav13-1A0A075B644 Nkain2-201ENSMUST00000092602 558 ntBASIC17.02■□□□□ 0.32
Trav13-1A0A075B644 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav13-1A0A075B644 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav13-1A0A075B644 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-1A0A075B644 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-1A0A075B644 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.01■□□□□ 0.31
Trav13-1A0A075B644 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-1A0A075B644 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13-1A0A075B644 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trav13-1A0A075B644 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trav13-1A0A075B644 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13-1A0A075B644 Gm42809-201ENSMUST00000198429 1138 ntBASIC17■□□□□ 0.31
Trav13-1A0A075B644 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13-1A0A075B644 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13-1A0A075B644 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Trav13-1A0A075B644 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13-1A0A075B644 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13-1A0A075B644 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav13-1A0A075B644 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav13-1A0A075B644 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-1A0A075B644 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13-1A0A075B644 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-1A0A075B644 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-1A0A075B644 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-1A0A075B644 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav13-1A0A075B644 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav13-1A0A075B644 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-1A0A075B644 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav13-1A0A075B644 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav13-1A0A075B644 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-1A0A075B644 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-1A0A075B644 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav13-1A0A075B644 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-1A0A075B644 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav13-1A0A075B644 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav13-1A0A075B644 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav13-1A0A075B644 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.92■□□□□ 0.3
Trav13-1A0A075B644 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-1A0A075B644 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav13-1A0A075B644 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
Trav13-1A0A075B644 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-1A0A075B644 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-1A0A075B644 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.91■□□□□ 0.3
Trav13-1A0A075B644 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.91■□□□□ 0.3
Trav13-1A0A075B644 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-1A0A075B644 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav13-1A0A075B644 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav13-1A0A075B644 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13-1A0A075B644 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13-1A0A075B644 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav13-1A0A075B644 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13-1A0A075B644 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav13-1A0A075B644 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-1A0A075B644 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-1A0A075B644 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.87■□□□□ 0.29
Trav13-1A0A075B644 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-1A0A075B644 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav13-1A0A075B644 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.86■□□□□ 0.29
Trav13-1A0A075B644 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav13-1A0A075B644 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13-1A0A075B644 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav13-1A0A075B644 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms