Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC9.32□□□□□ -0.92
MTHFRP42898 DIO2-211ENST00000557125 517 ntTSL 3 BASIC9.32□□□□□ -0.92
MTHFRP42898 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC9.32□□□□□ -0.92
MTHFRP42898 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC9.32□□□□□ -0.92
MTHFRP42898 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 BX255923.1-201ENST00000613309 681 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 AP003499.3-201ENST00000624680 857 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 AC068205.4-201ENST00000637880 804 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 ABBA01040607.1-201ENST00000640749 321 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
MTHFRP42898 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 AC079331.2-201ENST00000623462 2546 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 ERC1-225ENST00000611180 2832 ntTSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 AC100827.3-201ENST00000566291 2155 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC9.31□□□□□ -0.92
MTHFRP42898 OR4K1-202ENST00000641172 1339 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
MTHFRP42898 RP1-206ENST00000636932 3649 ntTSL 5 BASIC9.31□□□□□ -0.92
MTHFRP42898 CDH26-201ENST00000244049 1931 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 FSD1L-203ENST00000394926 1947 ntTSL 5 BASIC9.31□□□□□ -0.92
MTHFRP42898 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC9.31□□□□□ -0.92
MTHFRP42898 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC9.31□□□□□ -0.92
MTHFRP42898 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
MTHFRP42898 FO393411.1-201ENST00000325612 420 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 RNA5SP145-201ENST00000363124 125 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 EGFLAM-205ENST00000397210 1299 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 FTH1P26-201ENST00000406512 701 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC9.31□□□□□ -0.92
MTHFRP42898 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC9.31□□□□□ -0.92
MTHFRP42898 RPSAP53-201ENST00000433498 862 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 CLUHP5-201ENST00000438421 774 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 PFN1P1-201ENST00000442087 423 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 NPM1P51-201ENST00000443470 744 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 FAR2P3-205ENST00000447059 604 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 PCBP1-AS1-242ENST00000458686 1020 ntTSL 5 BASIC9.31□□□□□ -0.92
MTHFRP42898 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC9.31□□□□□ -0.92
MTHFRP42898 AC091805.1-201ENST00000498395 342 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC9.31□□□□□ -0.92
MTHFRP42898 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC9.31□□□□□ -0.92
MTHFRP42898 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC9.31□□□□□ -0.92
MTHFRP42898 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC9.31□□□□□ -0.92
MTHFRP42898 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC9.31□□□□□ -0.92
MTHFRP42898 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC9.31□□□□□ -0.92
MTHFRP42898 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC9.31□□□□□ -0.92
MTHFRP42898 AL023284.4-201ENST00000564248 374 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC9.31□□□□□ -0.92
MTHFRP42898 AC234791.1-201ENST00000620830 1203 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC9.31□□□□□ -0.92
MTHFRP42898 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 ENTPD1-210ENST00000543964 1579 ntTSL 2 BASIC9.31□□□□□ -0.92
MTHFRP42898 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 AC122688.4-201ENST00000623279 4394 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 BLNK-202ENST00000371176 1715 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
MTHFRP42898 AC007228.2-201ENST00000602145 1328 ntBASIC9.31□□□□□ -0.92
MTHFRP42898 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 CAPN3-201ENST00000318023 3172 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 TTC39C-203ENST00000540918 4117 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 LINC02363-201ENST00000317596 2153 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 ATF7IP-221ENST00000543189 4887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
MTHFRP42898 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC9.3□□□□□ -0.92
MTHFRP42898 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
MTHFRP42898 AC073621.2-201ENST00000381380 1024 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC9.3□□□□□ -0.92
MTHFRP42898 MIR1296-201ENST00000408136 92 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms