Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 CD40LG-202ENST00000370629 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AC100756.3-201ENST00000618455 1816 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 TPM3-201ENST00000271850 1219 ntAPPRIS ALT1 TSL 5 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 OR1F1-201ENST00000304646 942 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 MED20-203ENST00000409060 815 ntTSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 GUSBP4-201ENST00000423899 672 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 LINC00297-201ENST00000453470 913 ntTSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 RPS10P16-201ENST00000483812 496 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 RPL22-207ENST00000484532 449 ntTSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 RN7SL236P-201ENST00000484759 284 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 PTPN20-219ENST00000508602 742 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 PTPN20-221ENST00000509599 945 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 PTPN20-223ENST00000509900 693 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 MIR3945HG-202ENST00000511703 729 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 PTPN20-228ENST00000513266 818 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 RN7SKP52-201ENST00000516219 250 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 IGHV3-36-201ENST00000520848 401 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 SDR16C6P-202ENST00000524136 955 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AC003002.1-201ENST00000543226 732 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 RN7SL203P-201ENST00000579600 296 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 TREM1-204ENST00000589614 772 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AC245100.4-207ENST00000640776 1082 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 GABPB1-205ENST00000429662 1392 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 AL049842.1-201ENST00000402902 1479 ntBASIC9.34□□□□□ -0.91
LMO3Q8TAP4 RBMS2-204ENST00000550726 1452 ntTSL 2 BASIC9.34□□□□□ -0.91
LMO3Q8TAP4 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
LMO3Q8TAP4 AL445250.1-204ENST00000641775 1723 ntBASIC9.34□□□□□ -0.92
LMO3Q8TAP4 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 OR4C15-201ENST00000314644 1113 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 CD1E-201ENST00000368154 435 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 TRGV1-201ENST00000390348 465 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 SNRPGP11-201ENST00000411777 232 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 ZRANB2-AS2-203ENST00000415780 249 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 CYP4F62P-201ENST00000417310 524 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 RPS8P10-201ENST00000460876 622 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 IGKV1D-16-201ENST00000492446 378 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AP003532.1-201ENST00000529936 310 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AC137800.1-202ENST00000562098 446 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 FRG2HP-201ENST00000568807 832 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 HMGN2P46-208ENST00000598619 490 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AC093726.2-201ENST00000609134 679 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 AC135068.6-201ENST00000625294 622 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 MAPK10-301ENST00000641313 2482 ntBASIC9.33□□□□□ -0.92
LMO3Q8TAP4 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 LINC02287-201ENST00000555299 1384 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
LMO3Q8TAP4 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms