Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MAP3K7CL-205ENST00000399926 749 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
SLC1A1P43005 AL450468.1-201ENST00000415166 450 ntTSL 3 BASIC9.21□□□□□ -0.94
SLC1A1P43005 LINC00114-202ENST00000429621 827 ntTSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 AL158819.1-202ENST00000440645 447 ntTSL 2 BASIC9.21□□□□□ -0.94
SLC1A1P43005 AL365356.2-201ENST00000441526 196 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 RN7SL211P-201ENST00000485246 276 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 AC022092.1-201ENST00000510230 504 ntTSL 3 BASIC9.21□□□□□ -0.94
SLC1A1P43005 MRPS27-207ENST00000515404 1183 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 AP001767.1-201ENST00000530976 286 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 UBB-204ENST00000535788 704 ntTSL 2 BASIC9.21□□□□□ -0.94
SLC1A1P43005 AC013290.1-201ENST00000586960 537 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 TEX26-AS1-215ENST00000591300 815 ntTSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 AL080285.2-201ENST00000612765 458 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 BSNDP3-201ENST00000617487 364 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 AP003072.3-201ENST00000623456 594 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 AP003400.4-201ENST00000623832 399 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 AP001206.1-201ENST00000635554 720 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 MATN2-208ENST00000520016 3495 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC9.21□□□□□ -0.94
SLC1A1P43005 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 AC023050.4-201ENST00000538830 1380 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 AL049840.1-201ENST00000498989 1404 ntTSL 4 BASIC9.21□□□□□ -0.94
SLC1A1P43005 AC136285.1-201ENST00000566092 1447 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
SLC1A1P43005 FBXW11P1-201ENST00000393804 1474 ntBASIC9.21□□□□□ -0.94
SLC1A1P43005 CD200-202ENST00000383681 1997 ntTSL 2 BASIC9.21□□□□□ -0.94
SLC1A1P43005 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
SLC1A1P43005 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC9.2□□□□□ -0.94
SLC1A1P43005 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SLC1A1P43005 RNA5SP452-201ENST00000363004 119 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 RN7SKP22-201ENST00000365097 293 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 FRG1JP-201ENST00000376334 931 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 AL512430.3-201ENST00000405355 441 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 VN1R11P-201ENST00000407795 868 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 AP006222.1-201ENST00000442116 1292 ntTSL 5 BASIC9.2□□□□□ -0.94
SLC1A1P43005 HS6ST2-AS1-201ENST00000455269 550 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 AC010907.2-201ENST00000456450 693 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 CENPS-202ENST00000462462 584 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC9.2□□□□□ -0.94
SLC1A1P43005 ATP5L-202ENST00000524422 720 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 OR1D4-201ENST00000525719 939 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC9.2□□□□□ -0.94
SLC1A1P43005 BOLA3P1-201ENST00000530713 355 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 RAN-211ENST00000541679 572 ntTSL 5 BASIC9.2□□□□□ -0.94
SLC1A1P43005 AC023511.1-201ENST00000549055 571 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 MPHOSPH6-207ENST00000569021 392 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SLC1A1P43005 MIR4440-201ENST00000583986 98 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 LINC01764-201ENST00000587970 380 ntTSL 4 BASIC9.2□□□□□ -0.94
SLC1A1P43005 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC9.2□□□□□ -0.94
SLC1A1P43005 RN7SL726P-201ENST00000605957 299 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 AC027345.1-201ENST00000611900 500 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 MGST2-207ENST00000616265 1278 ntAPPRIS P1 TSL 4 BASIC9.2□□□□□ -0.94
SLC1A1P43005 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.2□□□□□ -0.94
SLC1A1P43005 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 ZFP57-201ENST00000376881 1359 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SLC1A1P43005 XRCC6P4-201ENST00000518193 2067 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 AC107398.3-201ENST00000562284 7000 ntBASIC9.2□□□□□ -0.94
SLC1A1P43005 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC9.2□□□□□ -0.94
SLC1A1P43005 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SLC1A1P43005 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
SLC1A1P43005 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
SLC1A1P43005 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC9.2□□□□□ -0.94
SLC1A1P43005 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC9.2□□□□□ -0.94
SLC1A1P43005 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SLC1A1P43005 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SLC1A1P43005 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SLC1A1P43005 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SLC1A1P43005 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SLC1A1P43005 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC9.19□□□□□ -0.94
SLC1A1P43005 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SLC1A1P43005 HSPA9P1-201ENST00000432228 2029 ntBASIC9.19□□□□□ -0.94
SLC1A1P43005 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC9.19□□□□□ -0.94
SLC1A1P43005 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms