Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 CLUL1-203ENST00000540035 2199 ntTSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 OR3A3-201ENST00000291231 966 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 TREM1-202ENST00000334475 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 GNRHR2-202ENST00000361928 1035 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 FAM209A-201ENST00000371328 911 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 SPINK4-202ENST00000379725 533 ntTSL 3 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC021016.1-201ENST00000414167 498 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 AURKC-202ENST00000415300 978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 IPO9-AS1-202ENST00000421159 456 ntTSL 3 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AL356124.1-201ENST00000430296 728 ntTSL 5 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 PFN1P1-201ENST00000442087 423 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 AL669970.1-201ENST00000444936 450 ntTSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 HCG25-220ENST00000450514 759 ntTSL 3 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 MRPS33-204ENST00000469351 744 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC010973.1-201ENST00000479085 511 ntTSL 4 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 RN7SL482P-201ENST00000487928 298 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC233724.2-201ENST00000515727 271 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC020612.1-201ENST00000547655 541 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 KRT18P47-201ENST00000561341 977 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 CYP1A1-205ENST00000564596 988 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC027277.2-201ENST00000566325 435 ntTSL 3 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC099518.5-201ENST00000567236 1137 ntTSL 3 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 OR3A3-202ENST00000574571 966 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AP001357.2-201ENST00000586758 710 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC107990.1-201ENST00000590415 489 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AURKC-207ENST00000599062 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC092723.1-201ENST00000599411 474 ntTSL 5 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC012491.1-201ENST00000605674 799 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC004853.2-201ENST00000609561 916 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 FAM238A-202ENST00000637359 442 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 FAM166B-207ENST00000639789 651 ntTSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC092652.3-201ENST00000473426 1517 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 TUBAP2-201ENST00000530835 1613 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 HAO2-202ENST00000361035 1668 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 AC005831.1-201ENST00000624384 1697 ntBASIC8.17□□□□□ -1.1
SNX18Q96RF0 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 CYP4A22-202ENST00000371890 1780 ntTSL 5 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 RBM26-AS1-201ENST00000456602 1756 ntTSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 RPL23AP7-202ENST00000416673 2078 ntTSL 2 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SNX18Q96RF0 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC8.17□□□□□ -1.1
SNX18Q96RF0 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 NXPE1-201ENST00000251921 1888 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 OR2S2-201ENST00000341959 1047 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 KCNIP2-204ENST00000353068 684 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 SNORA71A-201ENST00000364729 134 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AL353692.1-201ENST00000405081 755 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 AL603650.1-201ENST00000412680 240 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 ACTR3BP2-201ENST00000413404 1373 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 AL512635.1-201ENST00000414056 832 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 AL358781.2-201ENST00000415423 473 ntTSL 3 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 TIMM8AP1-201ENST00000419283 295 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC012354.2-201ENST00000423051 461 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC008267.4-201ENST00000442005 521 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 AL096701.1-201ENST00000445477 457 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 FP325330.1-201ENST00000457518 372 ntTSL 3 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 RN7SL607P-201ENST00000461220 299 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 RPS28P7-201ENST00000473748 210 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 IGKV1-27-201ENST00000498435 382 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC121161.2-201ENST00000502566 659 ntTSL 3 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC093768.1-201ENST00000505987 2173 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 MARCH1-214ENST00000514618 3903 ntTSL 5 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC8.16□□□□□ -1.1
SNX18Q96RF0 FAM149B1P1-201ENST00000533428 1610 ntBASIC8.16□□□□□ -1.1
SNX18Q96RF0 TMED10P1-201ENST00000534816 655 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms