Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AL031777.1-201ENST00000405418 499 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AL023773.2-201ENST00000412173 1005 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 ZNF587P1-201ENST00000415378 1386 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 WT1-AS_7.1-201ENST00000426618 294 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC009501.2-201ENST00000428700 312 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CFL1P1-203ENST00000438248 2120 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CYP4A22-AS1-201ENST00000444042 921 ntTSL 5 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 EFCAB2-207ENST00000447569 527 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 RN7SL401P-201ENST00000470065 298 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 ZNF525-203ENST00000475179 1868 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC110800.1-201ENST00000505498 441 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 OR10Y1P-201ENST00000528485 974 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 TRAPPC1-202ENST00000540486 759 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AL138690.1-201ENST00000568811 2243 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 MKL2-207ENST00000573051 1938 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC067796.1-201ENST00000586795 496 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC005050.1-201ENST00000591803 550 ntTSL 4 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 FO704657.1-201ENST00000607013 400 ntTSL 3 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC093726.2-201ENST00000609134 679 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC079174.2-201ENST00000611145 2028 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC010997.6-201ENST00000623230 1645 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 HRH2-204ENST00000636584 4067 ntTSL 3 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CDRT1-203ENST00000395667 3016 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AC092620.3-201ENST00000562796 2764 ntBASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 ATG4A-202ENST00000345734 2129 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 CNBD2-205ENST00000538900 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AC118282.4-201ENST00000623090 1712 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AC021491.4-201ENST00000620769 2573 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 Z97985.1-201ENST00000332270 946 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 LAIR2-202ENST00000351841 538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AL589763.1-201ENST00000412257 791 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 MYL6BP1-201ENST00000429485 615 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 RPS29P3-201ENST00000439929 171 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 ASS1P11-201ENST00000441309 1216 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AL353072.1-201ENST00000446021 442 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AL450023.2-201ENST00000453276 545 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AC020595.1-201ENST00000456446 533 ntTSL 3 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 RPS8P10-201ENST00000460876 622 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 RPL19P13-201ENST00000483119 583 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 RPL12P37-201ENST00000486874 495 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AC131934.1-201ENST00000527799 912 ntTSL 5 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 AC138466.2-201ENST00000540993 304 ntBASIC8.15□□□□□ -1.1
NPIPA3F8WFD2 SOX5-213ENST00000541847 758 ntTSL 3 BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms