Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 OSBPL10-AS1-201ENST00000417313 475 ntTSL 3 BASIC8.15□□□□□ -1.1
P04436 MTND6P15-201ENST00000441157 521 ntBASIC8.15□□□□□ -1.1
P04436 GYG1P3-201ENST00000449769 994 ntBASIC8.15□□□□□ -1.1
P04436 DEFT1P-201ENST00000453425 496 ntBASIC8.15□□□□□ -1.1
P04436 HNRNPCP7-201ENST00000456056 905 ntBASIC8.15□□□□□ -1.1
P04436 RN7SL749P-201ENST00000460421 290 ntBASIC8.15□□□□□ -1.1
P04436 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 PAX8-211ENST00000497038 816 ntTSL 5 BASIC8.15□□□□□ -1.1
P04436 IGKV1-27-201ENST00000498435 382 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
P04436 AC097522.1-201ENST00000507811 1042 ntBASIC8.15□□□□□ -1.1
P04436 AC098827.1-201ENST00000514630 667 ntBASIC8.15□□□□□ -1.1
P04436 ZNF123P-201ENST00000531501 1196 ntBASIC8.15□□□□□ -1.1
P04436 NPM1P50-201ENST00000532878 867 ntBASIC8.15□□□□□ -1.1
P04436 SLAMF1-204ENST00000538290 1087 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC8.15□□□□□ -1.1
P04436 AC128707.1-202ENST00000548963 693 ntTSL 5 BASIC8.15□□□□□ -1.1
P04436 AC060814.2-201ENST00000556905 1089 ntBASIC8.15□□□□□ -1.1
P04436 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC8.15□□□□□ -1.1
P04436 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC8.15□□□□□ -1.1
P04436 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC8.15□□□□□ -1.1
P04436 AC020779.2-201ENST00000568984 393 ntTSL 3 BASIC8.15□□□□□ -1.1
P04436 ZNF559-203ENST00000585352 967 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
P04436 AC005758.1-201ENST00000586408 625 ntBASIC8.15□□□□□ -1.1
P04436 RNF157-207ENST00000592271 755 ntTSL 2 BASIC8.15□□□□□ -1.1
P04436 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC8.15□□□□□ -1.1
P04436 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC8.15□□□□□ -1.1
P04436 AC067904.3-201ENST00000617126 261 ntBASIC8.15□□□□□ -1.1
P04436 AP000280.1-201ENST00000624800 832 ntBASIC8.15□□□□□ -1.1
P04436 AL109653.2-201ENST00000625029 1065 ntBASIC8.15□□□□□ -1.1
P04436 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC8.15□□□□□ -1.1
P04436 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC8.15□□□□□ -1.1
P04436 LINC01719-204ENST00000611275 2054 ntTSL 5 BASIC8.15□□□□□ -1.11
P04436 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
P04436 AC009502.1-201ENST00000607654 1965 ntBASIC8.15□□□□□ -1.11
P04436 ARHGAP25-209ENST00000479844 1933 ntTSL 5 BASIC8.15□□□□□ -1.11
P04436 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
P04436 TTC14-201ENST00000296015 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
P04436 ITIH2-202ENST00000379587 2848 ntTSL 5 BASIC8.15□□□□□ -1.11
P04436 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.15□□□□□ -1.11
P04436 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
P04436 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
P04436 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
P04436 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
P04436 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC8.14□□□□□ -1.11
P04436 ZNF665-201ENST00000396424 4159 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
P04436 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 MAPK10-382ENST00000642023 2369 ntBASIC8.14□□□□□ -1.11
P04436 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 ATL1-202ENST00000441560 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 OR9Q1-202ENST00000612174 2134 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
P04436 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 AC012464.3-201ENST00000604017 2773 ntBASIC8.14□□□□□ -1.11
P04436 AP003352.1-201ENST00000501016 1989 ntTSL 5 BASIC8.14□□□□□ -1.11
P04436 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 CST9LP1-201ENST00000376987 444 ntBASIC8.14□□□□□ -1.11
P04436 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
P04436 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 NUPR1-202ENST00000395641 550 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 LINC00385-201ENST00000435044 374 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 RPL10AP1-201ENST00000490023 643 ntBASIC8.14□□□□□ -1.11
P04436 AC093281.1-201ENST00000514239 549 ntBASIC8.14□□□□□ -1.11
P04436 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 RNA5SP459-201ENST00000516628 100 ntBASIC8.14□□□□□ -1.11
P04436 IGHV3-36-201ENST00000520848 401 ntBASIC8.14□□□□□ -1.11
P04436 AC025165.2-201ENST00000549477 699 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC8.14□□□□□ -1.11
P04436 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 AC233702.4-201ENST00000581610 304 ntBASIC8.14□□□□□ -1.11
P04436 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC8.14□□□□□ -1.11
P04436 AC073869.3-201ENST00000609270 580 ntTSL 5 BASIC8.14□□□□□ -1.11
P04436 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC8.14□□□□□ -1.11
P04436 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC8.14□□□□□ -1.11
P04436 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 RN7SL575P-201ENST00000620774 299 ntBASIC8.14□□□□□ -1.11
P04436 SEM1-223ENST00000623498 582 ntTSL 5 BASIC8.14□□□□□ -1.11
P04436 CU639417.5-201ENST00000623983 476 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC8.14□□□□□ -1.11
P04436 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 MITF-209ENST00000448226 2489 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
P04436 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 ADH1C-204ENST00000515683 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 ACSL5-205ENST00000433418 3281 ntTSL 5 BASIC8.14□□□□□ -1.11
P04436 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
P04436 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC8.14□□□□□ -1.11
P04436 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms