Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 TARS-202ENST00000455217 2523 ntTSL 2 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TROVE2-202ENST00000367443 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 AL360294.1-201ENST00000640945 2438 ntBASIC9.39□□□□□ -0.91
SYCE2Q6PIF2 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 DENND1A-204ENST00000394215 1380 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC011815.1-201ENST00000586922 4382 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 DDX11-229ENST00000545668 3751 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 BTN2A3P-201ENST00000377662 1836 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 LINC00461-212ENST00000511014 3539 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 ASH2LP2-201ENST00000453999 1561 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 NPIPA7-202ENST00000530217 1331 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 ACTR3C-206ENST00000613959 5142 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 HYDIN-203ENST00000321489 3685 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 POC5-211ENST00000510798 1524 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 TBC1D13-201ENST00000223865 3378 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 CENPS-201ENST00000309048 896 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 MIR614-201ENST00000385082 90 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC018641.1-201ENST00000435950 796 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 PFN1P1-201ENST00000442087 423 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 FAR2P3-205ENST00000447059 604 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AL137024.1-201ENST00000451100 728 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AL391825.1-202ENST00000458136 741 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC018638.4-201ENST00000465971 1150 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC092965.1-201ENST00000469748 490 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 RACK1-211ENST00000504726 388 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 HEXB-205ENST00000509579 806 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 MS4A6A-217ENST00000533023 780 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 DGKG-201ENST00000265022 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 DTNA-233ENST00000601125 1931 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 AKR1D1-201ENST00000242375 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 PXYLP1-207ENST00000508812 4158 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
SYCE2Q6PIF2 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AL391988.1-201ENST00000614747 1553 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 PTPRA-202ENST00000318266 3219 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 ERG-204ENST00000398907 4809 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 BMS1P1-201ENST00000374336 1332 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 FLJ22447-202ENST00000556569 1312 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 SS18-205ENST00000542420 2321 ntTSL 2 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 TTC3-202ENST00000355666 7712 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC019117.2-202ENST00000635900 1476 ntTSL 5 BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 AC073621.2-201ENST00000381380 1024 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 MIR1296-201ENST00000408136 92 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 U3.34-201ENST00000408198 212 ntBASIC9.37□□□□□ -0.91
SYCE2Q6PIF2 VN2R10P-201ENST00000411871 853 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms