Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 NTF6G-201ENST00000591094 616 ntBASIC23.38■■□□□ 1.33
CLIC4Q9Y696 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC23.38■■□□□ 1.33
CLIC4Q9Y696 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 AFG3L1P-217ENST00000557444 2447 ntBASIC23.37■■□□□ 1.33
CLIC4Q9Y696 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 AC087623.3-201ENST00000607047 1098 ntBASIC23.37■■□□□ 1.33
CLIC4Q9Y696 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLIC4Q9Y696 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 AC097381.1-201ENST00000429019 1296 ntBASIC23.36■■□□□ 1.33
CLIC4Q9Y696 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLIC4Q9Y696 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.35■■□□□ 1.33
CLIC4Q9Y696 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.34■■□□□ 1.33
CLIC4Q9Y696 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 AC007322.3-201ENST00000426526 701 ntBASIC23.33■■□□□ 1.33
CLIC4Q9Y696 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.33■■□□□ 1.33
CLIC4Q9Y696 AC034268.1-201ENST00000441047 882 ntBASIC23.33■■□□□ 1.33
CLIC4Q9Y696 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.33■■□□□ 1.33
CLIC4Q9Y696 MIR6821-201ENST00000617625 74 ntBASIC23.33■■□□□ 1.33
CLIC4Q9Y696 MYCNOS-205ENST00000641950 531 ntBASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms