Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HRH3Q9Y5N1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 AL391422.3-201ENST00000603791 2761 ntBASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 MIR4758-201ENST00000577688 71 ntBASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 AL591742.1-201ENST00000604433 565 ntBASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 AC066615.1-201ENST00000640911 628 ntBASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.86■□□□□ 0.61
HRH3Q9Y5N1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 AL512625.2-201ENST00000417533 625 ntBASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.85■□□□□ 0.61
HRH3Q9Y5N1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 AC073130.3-201ENST00000624389 2278 ntBASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HRH3Q9Y5N1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.83■□□□□ 0.61
HRH3Q9Y5N1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HRH3Q9Y5N1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HRH3Q9Y5N1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HRH3Q9Y5N1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HRH3Q9Y5N1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.83■□□□□ 0.6
HRH3Q9Y5N1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HRH3Q9Y5N1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms