Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHA3Q9Y5H8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDHA3Q9Y5H8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 YBX1P1-201ENST00000445822 960 ntBASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 AC243732.1-201ENST00000612648 864 ntBASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDHA3Q9Y5H8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 AC091799.1-201ENST00000422823 811 ntBASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 SLC7A5P1-201ENST00000568957 537 ntBASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 RBM17P2-201ENST00000616397 1405 ntBASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHA3Q9Y5H8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.34■■□□□ 1.01
PCDHA3Q9Y5H8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 TCF3P1-201ENST00000423021 1937 ntBASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHA3Q9Y5H8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA3Q9Y5H8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA3Q9Y5H8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.33■■□□□ 1
PCDHA3Q9Y5H8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCDHA3Q9Y5H8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA3Q9Y5H8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.32■■□□□ 1
PCDHA3Q9Y5H8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms