Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA1Q9Y5H4 AC010542.4-201ENST00000563151 1910 ntBASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 AL390719.1-204ENST00000412397 1219 ntBASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
PCDHGA1Q9Y5H4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 AC026471.6-201ENST00000622954 1905 ntBASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHGA1Q9Y5H4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 AC006557.6-201ENST00000623071 864 ntBASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA1Q9Y5H4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA1Q9Y5H4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms