Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF6Q9Y252 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF6Q9Y252 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF6Q9Y252 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.21■□□□□ 0.67
RNF6Q9Y252 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF6Q9Y252 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
RNF6Q9Y252 AC005224.4-201ENST00000583262 1652 ntBASIC19.2■□□□□ 0.66
RNF6Q9Y252 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF6Q9Y252 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
RNF6Q9Y252 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF6Q9Y252 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF6Q9Y252 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF6Q9Y252 AFG3L1P-217ENST00000557444 2447 ntBASIC19.2■□□□□ 0.66
RNF6Q9Y252 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 AC003102.1-202ENST00000563394 1796 ntBASIC19.19■□□□□ 0.66
RNF6Q9Y252 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.19■□□□□ 0.66
RNF6Q9Y252 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF6Q9Y252 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF6Q9Y252 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF6Q9Y252 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF6Q9Y252 AC009237.3-201ENST00000393279 1427 ntBASIC19.18■□□□□ 0.66
RNF6Q9Y252 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 PCDHAC2-203ENST00000615316 3011 ntBASIC19.18■□□□□ 0.66
RNF6Q9Y252 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF6Q9Y252 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 AC104187.1-201ENST00000607510 612 ntBASIC19.18■□□□□ 0.66
RNF6Q9Y252 PLK5-205ENST00000642079 1969 ntBASIC19.18■□□□□ 0.66
RNF6Q9Y252 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF6Q9Y252 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF6Q9Y252 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF6Q9Y252 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF6Q9Y252 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF6Q9Y252 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 KRT87P-202ENST00000534226 1464 ntBASIC19.17■□□□□ 0.66
RNF6Q9Y252 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 GPX1P1-201ENST00000388829 606 ntBASIC19.17■□□□□ 0.66
RNF6Q9Y252 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 MFSD11-216ENST00000590393 1141 ntBASIC19.17■□□□□ 0.66
RNF6Q9Y252 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF6Q9Y252 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF6Q9Y252 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF6Q9Y252 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF6Q9Y252 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF6Q9Y252 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF6Q9Y252 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF6Q9Y252 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF6Q9Y252 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF6Q9Y252 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF6Q9Y252 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF6Q9Y252 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms