Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 LINC01023-201ENST00000606054 436 ntBASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
SHANK2Q9UPX8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SHANK2Q9UPX8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
SHANK2Q9UPX8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
SHANK2Q9UPX8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
SHANK2Q9UPX8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SHANK2Q9UPX8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
SHANK2Q9UPX8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SHANK2Q9UPX8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
SHANK2Q9UPX8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC30.69■■■□□ 2.5
SHANK2Q9UPX8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 AC239809.2-201ENST00000415381 517 ntBASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 AC011484.1-201ENST00000377652 1995 ntBASIC30.68■■■□□ 2.5
SHANK2Q9UPX8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SHANK2Q9UPX8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SHANK2Q9UPX8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
SHANK2Q9UPX8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 AC233702.5-201ENST00000584107 538 ntBASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 Z99916.2-201ENST00000604037 246 ntBASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.64■■■□□ 2.5
SHANK2Q9UPX8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.49
SHANK2Q9UPX8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC30.64■■■□□ 2.49
SHANK2Q9UPX8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 KRT18P21-201ENST00000515767 1272 ntBASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 AC120498.8-201ENST00000614275 531 ntBASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
SHANK2Q9UPX8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC30.62■■■□□ 2.49
SHANK2Q9UPX8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms