Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX6Q9UPM6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LHX6Q9UPM6 TERF1P1-201ENST00000311003 1181 ntBASIC19.33■□□□□ 0.68
LHX6Q9UPM6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX6Q9UPM6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX6Q9UPM6 LINC01568-207ENST00000641790 1380 ntBASIC19.32■□□□□ 0.68
LHX6Q9UPM6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 FAM21FP-204ENST00000608637 956 ntBASIC19.31■□□□□ 0.68
LHX6Q9UPM6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LHX6Q9UPM6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms