Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 AC069236.1-201ENST00000604339 616 ntBASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHGC3Q9UN70 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 LINC01006-201ENST00000333319 2292 ntBASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 PGM5P4-201ENST00000421970 445 ntBASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 AC005181.1-201ENST00000604782 1256 ntBASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 OR10C1-204ENST00000622521 1039 ntBASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGC3Q9UN70 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGC3Q9UN70 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 AC092720.2-201ENST00000602388 1665 ntBASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 MCRIP2P1-201ENST00000394346 511 ntBASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 AC026185.1-201ENST00000445748 174 ntBASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 AL356652.1-201ENST00000615962 565 ntBASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 AC008694.1-202ENST00000636953 945 ntBASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGC3Q9UN70 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 AL512625.2-201ENST00000417533 625 ntBASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGC3Q9UN70 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHGC3Q9UN70 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGC3Q9UN70 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGC3Q9UN70 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHGC3Q9UN70 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PCDHGC3Q9UN70 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGC3Q9UN70 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHGC3Q9UN70 AC133552.2-202ENST00000575694 574 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms