Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 DUX4L16-201ENST00000555130 1264 ntBASIC20.83■□□□□ 0.93
UBP1Q9NZI7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 BID-214ENST00000617586 542 ntTSL 5 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
UBP1Q9NZI7 AC092437.1-201ENST00000624794 1048 ntBASIC20.83■□□□□ 0.93
UBP1Q9NZI7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
UBP1Q9NZI7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
UBP1Q9NZI7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.83■□□□□ 0.92
UBP1Q9NZI7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
UBP1Q9NZI7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBP1Q9NZI7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.83■□□□□ 0.92
UBP1Q9NZI7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBP1Q9NZI7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.81■□□□□ 0.92
UBP1Q9NZI7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 AP005212.1-201ENST00000581547 1997 ntBASIC20.8■□□□□ 0.92
UBP1Q9NZI7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 AC004911.1-201ENST00000416316 871 ntBASIC20.8■□□□□ 0.92
UBP1Q9NZI7 CNN2P6-201ENST00000439038 900 ntBASIC20.8■□□□□ 0.92
UBP1Q9NZI7 CDV3P1-201ENST00000471403 739 ntBASIC20.8■□□□□ 0.92
UBP1Q9NZI7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 AL591742.1-201ENST00000604433 565 ntBASIC20.8■□□□□ 0.92
UBP1Q9NZI7 AC013268.1-206ENST00000638368 961 ntBASIC20.8■□□□□ 0.92
UBP1Q9NZI7 AC112229.1-201ENST00000639295 961 ntBASIC20.8■□□□□ 0.92
UBP1Q9NZI7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
UBP1Q9NZI7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 AC073130.3-201ENST00000624389 2278 ntBASIC20.79■□□□□ 0.92
UBP1Q9NZI7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 AC016405.3-201ENST00000607710 860 ntBASIC20.79■□□□□ 0.92
UBP1Q9NZI7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBP1Q9NZI7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms