Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 SOX15-203ENST00000570788 1093 ntBASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 FAM197Y4-202ENST00000622692 608 ntBASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
NLGN3Q9NZ94 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 RPPH1-201ENST00000516869 333 ntBASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 C1QBPP2-201ENST00000528754 825 ntBASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.06■□□□□ 0.8
NLGN3Q9NZ94 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 RN7SL471P-201ENST00000580476 299 ntBASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NLGN3Q9NZ94 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 MIR718-201ENST00000390190 70 ntBASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NLGN3Q9NZ94 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 AC069544.1-201ENST00000609399 999 ntBASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NLGN3Q9NZ94 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NLGN3Q9NZ94 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLGN3Q9NZ94 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NLGN3Q9NZ94 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms