Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.83■■□□□ 1.25
BLOC1S4Q9NUP1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
BLOC1S4Q9NUP1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
BLOC1S4Q9NUP1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
BLOC1S4Q9NUP1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.83■■□□□ 1.24
BLOC1S4Q9NUP1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 LINC01521-201ENST00000504184 1943 ntBASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 KRT8P36-201ENST00000489121 1440 ntBASIC22.82■■□□□ 1.24
BLOC1S4Q9NUP1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 AC005181.1-201ENST00000604782 1256 ntBASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
BLOC1S4Q9NUP1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 AC092666.2-201ENST00000613287 246 ntBASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 AC087633.2-202ENST00000565166 1439 ntBASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
BLOC1S4Q9NUP1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 CROCCP5-201ENST00000436658 830 ntBASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
BLOC1S4Q9NUP1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 AC026185.1-201ENST00000445748 174 ntBASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 AC093787.1-201ENST00000450396 207 ntBASIC22.78■■□□□ 1.24
BLOC1S4Q9NUP1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms