Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRTM1Q9HBL6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRTM1Q9HBL6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRTM1Q9HBL6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.64■□□□□ 0.74
LRTM1Q9HBL6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 KRT18P14-201ENST00000534205 1250 ntBASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LRTM1Q9HBL6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 AC004854.2-201ENST00000608450 1441 ntBASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 MIR2861-201ENST00000636310 90 ntBASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRTM1Q9HBL6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 AC099778.1-201ENST00000568593 1911 ntBASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRTM1Q9HBL6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRTM1Q9HBL6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms