Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 KRT18P20-201ENST00000548986 1279 ntBASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 AC073130.3-201ENST00000624389 2278 ntBASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.3■□□□□ 0.52
SEC61A2Q9H9S3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 MFSD11-216ENST00000590393 1141 ntBASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 MYCNOS-205ENST00000641950 531 ntBASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SEC61A2Q9H9S3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 AC080038.1-201ENST00000611274 1154 ntBASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 BID-214ENST00000617586 542 ntTSL 5 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 RARRES2P11-201ENST00000635158 484 ntBASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SEC61A2Q9H9S3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 AC011484.1-201ENST00000377652 1995 ntBASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SEC61A2Q9H9S3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.27■□□□□ 0.51
SEC61A2Q9H9S3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEC61A2Q9H9S3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SEC61A2Q9H9S3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SEC61A2Q9H9S3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.27■□□□□ 0.51
SEC61A2Q9H9S3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.26■□□□□ 0.51
SEC61A2Q9H9S3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms