Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.25■□□□□ 0.35
ALX4Q9H161 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.25■□□□□ 0.35
ALX4Q9H161 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.25■□□□□ 0.35
ALX4Q9H161 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.25■□□□□ 0.35
ALX4Q9H161 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ALX4Q9H161 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ALX4Q9H161 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ALX4Q9H161 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ALX4Q9H161 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.24■□□□□ 0.35
ALX4Q9H161 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ALX4Q9H161 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ALX4Q9H161 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.24■□□□□ 0.35
ALX4Q9H161 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ALX4Q9H161 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
ALX4Q9H161 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.23■□□□□ 0.35
ALX4Q9H161 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ALX4Q9H161 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX4Q9H161 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.23■□□□□ 0.35
ALX4Q9H161 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
ALX4Q9H161 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX4Q9H161 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ALX4Q9H161 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ALX4Q9H161 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX4Q9H161 AC005332.7-201ENST00000614046 2005 ntBASIC17.23■□□□□ 0.35
ALX4Q9H161 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.23■□□□□ 0.35
ALX4Q9H161 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.22■□□□□ 0.35
ALX4Q9H161 AC019069.1-201ENST00000610008 1333 ntBASIC17.22■□□□□ 0.35
ALX4Q9H161 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ALX4Q9H161 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.22■□□□□ 0.35
ALX4Q9H161 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.22■□□□□ 0.35
ALX4Q9H161 OR2I1P-207ENST00000453522 948 ntBASIC17.22■□□□□ 0.35
ALX4Q9H161 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.22■□□□□ 0.35
ALX4Q9H161 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.22■□□□□ 0.35
ALX4Q9H161 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ALX4Q9H161 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.22■□□□□ 0.35
ALX4Q9H161 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.22■□□□□ 0.35
ALX4Q9H161 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ALX4Q9H161 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ALX4Q9H161 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ALX4Q9H161 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ALX4Q9H161 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
ALX4Q9H161 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 AC092720.2-201ENST00000602388 1665 ntBASIC17.21■□□□□ 0.35
ALX4Q9H161 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.21■□□□□ 0.35
ALX4Q9H161 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.21■□□□□ 0.35
ALX4Q9H161 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
ALX4Q9H161 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.21■□□□□ 0.35
ALX4Q9H161 AL138724.1-201ENST00000606771 1088 ntBASIC17.21■□□□□ 0.35
ALX4Q9H161 AC011298.3-201ENST00000615796 283 ntBASIC17.21■□□□□ 0.35
ALX4Q9H161 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.21■□□□□ 0.35
ALX4Q9H161 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.21■□□□□ 0.35
ALX4Q9H161 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ALX4Q9H161 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.21■□□□□ 0.35
ALX4Q9H161 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ALX4Q9H161 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ALX4Q9H161 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.21■□□□□ 0.34
ALX4Q9H161 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.21■□□□□ 0.34
ALX4Q9H161 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.21■□□□□ 0.34
ALX4Q9H161 AC011484.1-201ENST00000377652 1995 ntBASIC17.2■□□□□ 0.34
ALX4Q9H161 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms