Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
FAM49AQ9H0Q0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
FAM49AQ9H0Q0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
FAM49AQ9H0Q0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 RPS2P4-201ENST00000476944 856 ntBASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 FAM197Y4-202ENST00000622692 608 ntBASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FAM49AQ9H0Q0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 Z98882.1-201ENST00000622160 2253 ntBASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 RPPH1-201ENST00000516869 333 ntBASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 AC069544.1-201ENST00000609399 999 ntBASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
FAM49AQ9H0Q0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FAM49AQ9H0Q0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
FAM49AQ9H0Q0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms