Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 AC092720.2-201ENST00000602388 1665 ntBASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDHD3Q9BSH5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 AC008175.2-201ENST00000612840 297 ntBASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.25■□□□□ 0.35
HDHD3Q9BSH5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 RARRES2P11-201ENST00000635158 484 ntBASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDHD3Q9BSH5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 AC079140.4-201ENST00000507448 529 ntBASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 AL354811.1-201ENST00000610286 706 ntBASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HDHD3Q9BSH5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 POU5F1P4-201ENST00000413175 1085 ntBASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 KRT87P-202ENST00000534226 1464 ntBASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HDHD3Q9BSH5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDHD3Q9BSH5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms