Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PAAF1Q9BRP4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PAAF1Q9BRP4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.95■■□□□ 1.1
PAAF1Q9BRP4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PAAF1Q9BRP4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PAAF1Q9BRP4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.93■■□□□ 1.1
PAAF1Q9BRP4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 AF106564.1-201ENST00000607058 2553 ntBASIC21.92■■□□□ 1.1
PAAF1Q9BRP4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.91■■□□□ 1.1
PAAF1Q9BRP4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 AL049796.1-201ENST00000565336 1766 ntBASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PAAF1Q9BRP4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PAAF1Q9BRP4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PAAF1Q9BRP4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 AL359736.2-201ENST00000621992 437 ntBASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 LINC00565-201ENST00000562710 2331 ntBASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PAAF1Q9BRP4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 PGM5P4-201ENST00000421970 445 ntBASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PAAF1Q9BRP4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms