Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH15Q96QU1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 AP001412.1-201ENST00000608405 714 ntBASIC20.1■□□□□ 0.81
PCDH15Q96QU1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 AL445228.2-201ENST00000605589 952 ntBASIC20.1■□□□□ 0.81
PCDH15Q96QU1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDH15Q96QU1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH15Q96QU1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 AC242852.2-201ENST00000615738 1807 ntBASIC20.08■□□□□ 0.81
PCDH15Q96QU1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDH15Q96QU1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 GUSBP5-202ENST00000510805 1989 ntBASIC20.08■□□□□ 0.8
PCDH15Q96QU1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.08■□□□□ 0.8
PCDH15Q96QU1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDH15Q96QU1 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms