Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 MIR1224-201ENST00000408193 85 ntBASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 LINC01023-201ENST00000606054 436 ntBASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC46A1Q96NT5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC46A1Q96NT5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 CYP21A1P-202ENST00000354927 1481 ntBASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC46A1Q96NT5 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 AC012618.2-201ENST00000428058 849 ntBASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLC46A1Q96NT5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC46A1Q96NT5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC46A1Q96NT5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms