Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC115Q96NT0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC115Q96NT0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC115Q96NT0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.43■□□□□ 0.7
CCDC115Q96NT0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 AC120498.10-201ENST00000621827 505 ntBASIC19.43■□□□□ 0.7
CCDC115Q96NT0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 LINC02228-203ENST00000641970 1355 ntBASIC19.43■□□□□ 0.7
CCDC115Q96NT0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC115Q96NT0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC115Q96NT0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 AC112907.3-201ENST00000577781 2400 ntBASIC19.41■□□□□ 0.7
CCDC115Q96NT0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC115Q96NT0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4L2-201ENST00000561772 1275 ntBASIC19.4■□□□□ 0.7
CCDC115Q96NT0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4L6-201ENST00000626483 1275 ntBASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4L1-201ENST00000627662 1275 ntBASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4L8-201ENST00000629013 1275 ntBASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4L3-201ENST00000630187 1275 ntBASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4L7-201ENST00000630678 1275 ntBASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DUX4L5-201ENST00000630834 1275 ntBASIC19.4■□□□□ 0.7
CCDC115Q96NT0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC115Q96NT0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC115Q96NT0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC115Q96NT0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms