Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PHACTR3Q96KR7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PHACTR3Q96KR7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PHACTR3Q96KR7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PHACTR3Q96KR7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PHACTR3Q96KR7 AC007375.3-201ENST00000600936 2314 ntBASIC26.95■■□□□ 1.91
PHACTR3Q96KR7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 HLA-B-256ENST00000639848 1089 ntBASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.95■■□□□ 1.9
PHACTR3Q96KR7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.94■■□□□ 1.9
PHACTR3Q96KR7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PHACTR3Q96KR7 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PHACTR3Q96KR7 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.93■■□□□ 1.9
PHACTR3Q96KR7 AC060766.5-201ENST00000590539 871 ntBASIC26.93■■□□□ 1.9
PHACTR3Q96KR7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PHACTR3Q96KR7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 PRORSD1P-201ENST00000295112 541 ntBASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 AC008687.6-201ENST00000596318 630 ntBASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 ITM2C-210ENST00000620962 501 ntBASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
PHACTR3Q96KR7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 MIR2861-201ENST00000636310 90 ntBASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PHACTR3Q96KR7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 PNMA6B-201ENST00000538162 1200 ntBASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.9■■□□□ 1.9
PHACTR3Q96KR7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.89■■□□□ 1.9
PHACTR3Q96KR7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.89■■□□□ 1.89
PHACTR3Q96KR7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.89■■□□□ 1.89
PHACTR3Q96KR7 AL121603.2-201ENST00000557373 2117 ntBASIC26.89■■□□□ 1.89
PHACTR3Q96KR7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.89■■□□□ 1.89
PHACTR3Q96KR7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
PHACTR3Q96KR7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PHACTR3Q96KR7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms