Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SPG11Q96JI7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SPG11Q96JI7 NUDT16P1-203ENST00000513809 620 ntBASIC17.43■□□□□ 0.38
SPG11Q96JI7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 AC087633.2-202ENST00000565166 1439 ntBASIC17.43■□□□□ 0.38
SPG11Q96JI7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPG11Q96JI7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPG11Q96JI7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPG11Q96JI7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPG11Q96JI7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPG11Q96JI7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 AC026471.5-201ENST00000615068 467 ntBASIC17.43■□□□□ 0.38
SPG11Q96JI7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPG11Q96JI7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SPG11Q96JI7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.42■□□□□ 0.38
SPG11Q96JI7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPG11Q96JI7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.42■□□□□ 0.38
SPG11Q96JI7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SPG11Q96JI7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.41■□□□□ 0.38
SPG11Q96JI7 AC073195.1-201ENST00000607241 877 ntBASIC17.41■□□□□ 0.38
SPG11Q96JI7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.41■□□□□ 0.38
SPG11Q96JI7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SPG11Q96JI7 AF186192.3-201ENST00000583427 947 ntBASIC17.41■□□□□ 0.38
SPG11Q96JI7 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.41■□□□□ 0.38
SPG11Q96JI7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.41■□□□□ 0.38
SPG11Q96JI7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.41■□□□□ 0.38
SPG11Q96JI7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SPG11Q96JI7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPG11Q96JI7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPG11Q96JI7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 TPM4P1-201ENST00000436100 807 ntBASIC17.4■□□□□ 0.38
SPG11Q96JI7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPG11Q96JI7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPG11Q96JI7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPG11Q96JI7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPG11Q96JI7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPG11Q96JI7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SPG11Q96JI7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.39■□□□□ 0.38
SPG11Q96JI7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.39■□□□□ 0.38
SPG11Q96JI7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.39■□□□□ 0.38
SPG11Q96JI7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 AC124283.5-201ENST00000624661 1809 ntBASIC17.39■□□□□ 0.37
SPG11Q96JI7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 AL355355.2-201ENST00000442321 338 ntBASIC17.39■□□□□ 0.37
SPG11Q96JI7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms