Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VPS50Q96JG6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VPS50Q96JG6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS50Q96JG6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS50Q96JG6 AC010141.2-201ENST00000452426 721 ntBASIC19.91■□□□□ 0.78
VPS50Q96JG6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.91■□□□□ 0.78
VPS50Q96JG6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS50Q96JG6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
VPS50Q96JG6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS50Q96JG6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS50Q96JG6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS50Q96JG6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 AC053503.5-201ENST00000601508 636 ntBASIC19.9■□□□□ 0.78
VPS50Q96JG6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 MYCNOS-205ENST00000641950 531 ntBASIC19.9■□□□□ 0.78
VPS50Q96JG6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 AP006587.3-201ENST00000525742 1516 ntBASIC19.9■□□□□ 0.78
VPS50Q96JG6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS50Q96JG6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS50Q96JG6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
VPS50Q96JG6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS50Q96JG6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS50Q96JG6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS50Q96JG6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS50Q96JG6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
VPS50Q96JG6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VPS50Q96JG6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS50Q96JG6 RAP2CP1-201ENST00000605103 478 ntBASIC19.89■□□□□ 0.77
VPS50Q96JG6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS50Q96JG6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 AC007322.1-201ENST00000426983 750 ntBASIC19.88■□□□□ 0.77
VPS50Q96JG6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 AC008175.2-201ENST00000612840 297 ntBASIC19.88■□□□□ 0.77
VPS50Q96JG6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS50Q96JG6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VPS50Q96JG6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
VPS50Q96JG6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
VPS50Q96JG6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS50Q96JG6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS50Q96JG6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS50Q96JG6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VPS50Q96JG6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VPS50Q96JG6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms