Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE4Q96A23 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE4Q96A23 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE4Q96A23 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CPNE4Q96A23 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 CYP2T3P-201ENST00000601990 817 ntBASIC18.36■□□□□ 0.53
CPNE4Q96A23 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.36■□□□□ 0.53
CPNE4Q96A23 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 AL355802.2-201ENST00000402069 882 ntBASIC18.35■□□□□ 0.53
CPNE4Q96A23 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 MIR4758-201ENST00000577688 71 ntBASIC18.35■□□□□ 0.53
CPNE4Q96A23 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CPNE4Q96A23 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
CPNE4Q96A23 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 MIPEPP3-201ENST00000412105 444 ntBASIC18.34■□□□□ 0.53
CPNE4Q96A23 BX276092.2-201ENST00000417668 665 ntBASIC18.34■□□□□ 0.53
CPNE4Q96A23 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 AC142086.2-201ENST00000569753 217 ntBASIC18.34■□□□□ 0.53
CPNE4Q96A23 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CPNE4Q96A23 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE4Q96A23 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE4Q96A23 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CPNE4Q96A23 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.33■□□□□ 0.53
CPNE4Q96A23 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.33■□□□□ 0.53
CPNE4Q96A23 AC087633.2-202ENST00000565166 1439 ntBASIC18.33■□□□□ 0.53
CPNE4Q96A23 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE4Q96A23 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE4Q96A23 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE4Q96A23 LSM12P1-201ENST00000411836 588 ntBASIC18.33■□□□□ 0.52
CPNE4Q96A23 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE4Q96A23 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 AL589743.5-201ENST00000616611 1050 ntBASIC18.33■□□□□ 0.52
CPNE4Q96A23 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE4Q96A23 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE4Q96A23 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE4Q96A23 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE4Q96A23 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE4Q96A23 KRT18P68-201ENST00000392293 1000 ntBASIC18.32■□□□□ 0.52
CPNE4Q96A23 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE4Q96A23 AC092118.2-201ENST00000613495 667 ntBASIC18.32■□□□□ 0.52
CPNE4Q96A23 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms