Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.32■■□□□ 1.32
USP6NLQ92738 AC133561.5-201ENST00000635547 218 ntBASIC23.32■■□□□ 1.32
USP6NLQ92738 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP6NLQ92738 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
USP6NLQ92738 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
USP6NLQ92738 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.32■■□□□ 1.32
USP6NLQ92738 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.31■■□□□ 1.32
USP6NLQ92738 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.31■■□□□ 1.32
USP6NLQ92738 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.31■■□□□ 1.32
USP6NLQ92738 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
USP6NLQ92738 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
USP6NLQ92738 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.31■■□□□ 1.32
USP6NLQ92738 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
USP6NLQ92738 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
USP6NLQ92738 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.31■■□□□ 1.32
USP6NLQ92738 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6NLQ92738 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.3■■□□□ 1.32
USP6NLQ92738 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.3■■□□□ 1.32
USP6NLQ92738 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.3■■□□□ 1.32
USP6NLQ92738 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.3■■□□□ 1.32
USP6NLQ92738 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
USP6NLQ92738 AL355075.4-201ENST00000554988 638 ntBASIC23.3■■□□□ 1.32
USP6NLQ92738 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.3■■□□□ 1.32
USP6NLQ92738 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.3■■□□□ 1.32
USP6NLQ92738 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP6NLQ92738 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6NLQ92738 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6NLQ92738 MOK-233ENST00000524214 1539 ntTSL 2 BASIC23.29■■□□□ 1.32
USP6NLQ92738 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.29■■□□□ 1.32
USP6NLQ92738 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6NLQ92738 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6NLQ92738 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6NLQ92738 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
USP6NLQ92738 RCN1P1-201ENST00000400413 996 ntBASIC23.29■■□□□ 1.32
USP6NLQ92738 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.29■■□□□ 1.32
USP6NLQ92738 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC23.29■■□□□ 1.32
USP6NLQ92738 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
USP6NLQ92738 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.29■■□□□ 1.32
USP6NLQ92738 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
USP6NLQ92738 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.29■■□□□ 1.32
USP6NLQ92738 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.29■■□□□ 1.32
USP6NLQ92738 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.29■■□□□ 1.32
USP6NLQ92738 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
USP6NLQ92738 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.28■■□□□ 1.32
USP6NLQ92738 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
USP6NLQ92738 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.28■■□□□ 1.32
USP6NLQ92738 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.28■■□□□ 1.32
USP6NLQ92738 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.28■■□□□ 1.32
USP6NLQ92738 PRKY-204ENST00000533551 1019 ntBASIC23.28■■□□□ 1.32
USP6NLQ92738 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.28■■□□□ 1.32
USP6NLQ92738 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC23.28■■□□□ 1.32
USP6NLQ92738 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC23.28■■□□□ 1.32
USP6NLQ92738 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
USP6NLQ92738 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.28■■□□□ 1.32
USP6NLQ92738 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
USP6NLQ92738 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP6NLQ92738 C1orf229-201ENST00000623686 2258 ntBASIC23.28■■□□□ 1.32
USP6NLQ92738 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP6NLQ92738 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP6NLQ92738 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
USP6NLQ92738 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
USP6NLQ92738 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP6NLQ92738 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.27■■□□□ 1.32
USP6NLQ92738 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.27■■□□□ 1.32
USP6NLQ92738 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC23.27■■□□□ 1.32
USP6NLQ92738 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.27■■□□□ 1.32
USP6NLQ92738 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP6NLQ92738 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
USP6NLQ92738 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
USP6NLQ92738 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
USP6NLQ92738 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.27■■□□□ 1.31
USP6NLQ92738 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
USP6NLQ92738 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
USP6NLQ92738 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.26■■□□□ 1.31
USP6NLQ92738 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC23.26■■□□□ 1.31
USP6NLQ92738 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
USP6NLQ92738 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
USP6NLQ92738 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms