Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF4Q92544 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF4Q92544 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.27■□□□□ 0.68
TM9SF4Q92544 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TM9SF4Q92544 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF4Q92544 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF4Q92544 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.27■□□□□ 0.68
TM9SF4Q92544 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.27■□□□□ 0.68
TM9SF4Q92544 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.27■□□□□ 0.68
TM9SF4Q92544 AP006294.2-201ENST00000641667 209 ntBASIC19.27■□□□□ 0.68
TM9SF4Q92544 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.27■□□□□ 0.68
TM9SF4Q92544 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF4Q92544 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TM9SF4Q92544 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF4Q92544 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF4Q92544 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF4Q92544 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF4Q92544 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF4Q92544 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF4Q92544 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF4Q92544 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF4Q92544 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF4Q92544 LSM12P1-201ENST00000411836 588 ntBASIC19.26■□□□□ 0.67
TM9SF4Q92544 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TM9SF4Q92544 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TM9SF4Q92544 AC091874.3-201ENST00000512672 1195 ntBASIC19.26■□□□□ 0.67
TM9SF4Q92544 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.26■□□□□ 0.67
TM9SF4Q92544 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.26■□□□□ 0.67
TM9SF4Q92544 MYC-209ENST00000641252 345 ntBASIC19.26■□□□□ 0.67
TM9SF4Q92544 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF4Q92544 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.26■□□□□ 0.67
TM9SF4Q92544 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TM9SF4Q92544 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF4Q92544 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF4Q92544 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF4Q92544 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 AC092667.1-201ENST00000434301 2586 ntBASIC19.25■□□□□ 0.67
TM9SF4Q92544 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF4Q92544 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF4Q92544 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF4Q92544 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TM9SF4Q92544 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TM9SF4Q92544 ESRRAP1-201ENST00000400596 1257 ntBASIC19.24■□□□□ 0.67
TM9SF4Q92544 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 DUSP5P2-201ENST00000426873 1033 ntBASIC19.24■□□□□ 0.67
TM9SF4Q92544 AC245052.3-201ENST00000450182 901 ntBASIC19.24■□□□□ 0.67
TM9SF4Q92544 CDV3P1-201ENST00000471403 739 ntBASIC19.24■□□□□ 0.67
TM9SF4Q92544 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.24■□□□□ 0.67
TM9SF4Q92544 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 AC083880.1-201ENST00000608266 535 ntBASIC19.24■□□□□ 0.67
TM9SF4Q92544 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
TM9SF4Q92544 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF4Q92544 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TM9SF4Q92544 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TM9SF4Q92544 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.24■□□□□ 0.67
TM9SF4Q92544 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TM9SF4Q92544 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 AC061975.6-201ENST00000579045 1553 ntBASIC19.23■□□□□ 0.67
TM9SF4Q92544 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.23■□□□□ 0.67
TM9SF4Q92544 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM9SF4Q92544 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
TM9SF4Q92544 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms