Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 AC091799.1-201ENST00000422823 811 ntBASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 AL162412.1-201ENST00000567129 965 ntBASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 RAP2CP1-201ENST00000605103 478 ntBASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 AC073111.5-205ENST00000641717 521 ntBASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 AC007952.6-201ENST00000573168 2673 ntBASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 AC003957.1-201ENST00000625108 2673 ntBASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HMGCLL1Q8TB92 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 CDCA4P2-201ENST00000441182 718 ntBASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HMGCLL1Q8TB92 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.08■□□□□ 0.81
HMGCLL1Q8TB92 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.8
HMGCLL1Q8TB92 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.08■□□□□ 0.8
HMGCLL1Q8TB92 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCLL1Q8TB92 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.08■□□□□ 0.8
HMGCLL1Q8TB92 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
HMGCLL1Q8TB92 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
HMGCLL1Q8TB92 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.08■□□□□ 0.8
HMGCLL1Q8TB92 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.07■□□□□ 0.8
HMGCLL1Q8TB92 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 AL591742.1-201ENST00000604433 565 ntBASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms