Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 PGM5P4-201ENST00000421970 445 ntBASIC17.77■□□□□ 0.44
LINC01560Q8TB33 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 AL023875.1-201ENST00000640777 796 ntBASIC17.77■□□□□ 0.44
LINC01560Q8TB33 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.77■□□□□ 0.44
LINC01560Q8TB33 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LINC01560Q8TB33 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LINC01560Q8TB33 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.77■□□□□ 0.43
LINC01560Q8TB33 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.77■□□□□ 0.43
LINC01560Q8TB33 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LINC01560Q8TB33 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.75■□□□□ 0.43
LINC01560Q8TB33 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 MTDHP1-201ENST00000605323 784 ntBASIC17.75■□□□□ 0.43
LINC01560Q8TB33 AC120498.8-201ENST00000614275 531 ntBASIC17.75■□□□□ 0.43
LINC01560Q8TB33 AL356652.1-201ENST00000615962 565 ntBASIC17.75■□□□□ 0.43
LINC01560Q8TB33 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LINC01560Q8TB33 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 AC005829.2-201ENST00000571422 1056 ntBASIC17.74■□□□□ 0.43
LINC01560Q8TB33 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
LINC01560Q8TB33 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 AL390719.1-204ENST00000412397 1219 ntBASIC17.73■□□□□ 0.43
LINC01560Q8TB33 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LINC01560Q8TB33 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms