Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 AC011767.1-201ENST00000617410 1153 ntBASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PCDH19Q8TAB3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH19Q8TAB3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDH19Q8TAB3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH19Q8TAB3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDH19Q8TAB3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH19Q8TAB3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 CDV3P1-201ENST00000471403 739 ntBASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 DUX4L16-201ENST00000555130 1264 ntBASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDH19Q8TAB3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 AL591742.1-201ENST00000604433 565 ntBASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 AC013268.1-206ENST00000638368 961 ntBASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 AC112229.1-201ENST00000639295 961 ntBASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH19Q8TAB3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 ID1-201ENST00000376105 1233 ntBASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 CNN2P6-201ENST00000439038 900 ntBASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 AC007322.4-201ENST00000509611 723 ntBASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH19Q8TAB3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 AC016405.3-201ENST00000607710 860 ntBASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 BID-214ENST00000617586 542 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 AC073111.5-205ENST00000641717 521 ntBASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDH19Q8TAB3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDH19Q8TAB3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms