Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 AC091799.1-201ENST00000422823 811 ntBASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 FAM201B-201ENST00000458407 597 ntBASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLDND2Q8NHS1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CLDND2Q8NHS1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 AC097658.1-201ENST00000475555 843 ntBASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDND2Q8NHS1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDND2Q8NHS1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 CDV3P1-201ENST00000471403 739 ntBASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 AC083880.1-201ENST00000608266 535 ntBASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDND2Q8NHS1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDND2Q8NHS1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDND2Q8NHS1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDND2Q8NHS1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDND2Q8NHS1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDND2Q8NHS1 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms