Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.32■■□□□ 1.64
RTL9Q8NET4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RTL9Q8NET4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 AC005829.2-201ENST00000571422 1056 ntBASIC25.31■■□□□ 1.64
RTL9Q8NET4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC25.31■■□□□ 1.64
RTL9Q8NET4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.31■■□□□ 1.64
RTL9Q8NET4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.31■■□□□ 1.64
RTL9Q8NET4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC25.31■■□□□ 1.64
RTL9Q8NET4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.31■■□□□ 1.64
RTL9Q8NET4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
RTL9Q8NET4 RPPH1-201ENST00000516869 333 ntBASIC25.31■■□□□ 1.64
RTL9Q8NET4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.31■■□□□ 1.64
RTL9Q8NET4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RTL9Q8NET4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
RTL9Q8NET4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 Z98882.1-201ENST00000622160 2253 ntBASIC25.3■■□□□ 1.64
RTL9Q8NET4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC25.3■■□□□ 1.64
RTL9Q8NET4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.3■■□□□ 1.64
RTL9Q8NET4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RTL9Q8NET4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC25.29■■□□□ 1.64
RTL9Q8NET4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RTL9Q8NET4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
RTL9Q8NET4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC25.28■■□□□ 1.64
RTL9Q8NET4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.28■■□□□ 1.64
RTL9Q8NET4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 C1QBPP2-201ENST00000528754 825 ntBASIC25.28■■□□□ 1.64
RTL9Q8NET4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.28■■□□□ 1.64
RTL9Q8NET4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RTL9Q8NET4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTL9Q8NET4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTL9Q8NET4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTL9Q8NET4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RTL9Q8NET4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.27■■□□□ 1.64
RTL9Q8NET4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC25.27■■□□□ 1.64
RTL9Q8NET4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
RTL9Q8NET4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.27■■□□□ 1.64
RTL9Q8NET4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
RTL9Q8NET4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
RTL9Q8NET4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
RTL9Q8NET4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC25.26■■□□□ 1.64
RTL9Q8NET4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 AC027702.1-201ENST00000563810 1770 ntBASIC25.26■■□□□ 1.63
RTL9Q8NET4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
RTL9Q8NET4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RTL9Q8NET4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms